Project measure / variable:   Peters4   WBC_M12

ID, description, units MPD:24302   WBC_M12   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - white blood cell count (WBC; per volume x 103) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means7.68   n/µL 8.98   n/µL
Median of the strain means6.89   n/µL 8.61   n/µL
SD of the strain means± 2.81 ± 2.74
Coefficient of variation (CV)0.366 0.305
Min–max range of strain means4.43   –   12.7   n/µL 5.14   –   13.4   n/µL
Mean sample size per strain7.8   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 172.9165 172.9165 36.0804 < 0.0001
strain 29 2862.1493 98.6948 20.5935 < 0.0001
sex:strain 29 477.6594 16.471 3.4368 < 0.0001
Residuals 393 1883.4642 4.7925


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.48 1.36   8 0.48 0.21 4.27, 8.61 -0.43
129S1/SvImJ m 6.29 2.91   7 1.1 0.462 3.39, 10.8 -0.98
A/J f 5.63 1.96   7 0.741 0.348 3.5, 9.6 -0.73
A/J m 6.02 2.66   6 1.08 0.441 3.93, 10.9 -1.08
BALB/cByJ f 6.65 2.41   7 0.913 0.363 2.94, 9.93 -0.37
BALB/cByJ m 10.3 1.99   7 0.751 0.193 7.69, 12.8 0.48
BTBR T+ Itpr3tf/J f 9.88 0.983   8 0.348 0.0995 8.18, 10.9 0.79
BTBR T+ Itpr3tf/J m 12.4 2.69   8 0.952 0.216 10.4, 16.8 1.25
BUB/BnJ f 11.6 2.44   7 0.924 0.211 7.0, 14.3 1.4
BUB/BnJ m 12.8 3.14   6 1.28 0.245 8.32, 16.3 1.39
C3H/HeJ f 6.33 1.52   8 0.539 0.241 5.31, 9.99 -0.48
C3H/HeJ m 8.5 0.855   8 0.302 0.101 7.21, 9.42 -0.17
C57BL/10J f 10.2 2.71   9 0.902 0.266 6.83, 15.8 0.9
C57BL/10J m 12.3 1.86   8 0.659 0.152 9.61, 14.9 1.21
C57BL/6J f 9.41 2.87   7 1.08 0.305 4.57, 13.1 0.62
C57BL/6J m 13.1 1.71   6 0.699 0.131 10.6, 14.7 1.5
C57BLKS/J f 12.7 2.86   8 1.01 0.226 7.9, 16.6 1.79
C57BLKS/J m 9.86 2.15   8 0.762 0.219 7.68, 13.4 0.32
C57BR/cdJ f 11.0 2.38   8 0.843 0.217 8.28, 16.3 1.18
C57BR/cdJ m 13.3 1.21   8 0.426 0.0909 11.4, 15.0 1.58
C57L/J f 6.06 1.6   8 0.567 0.265 3.85, 9.19 -0.58
C57L/J m 8.75 1.98   8 0.699 0.226 4.31, 11.1 -0.08
CAST/EiJ f 10.1 2.9   8 1.03 0.286 6.08, 15.6 0.86
CAST/EiJ m 10.2 3.41   6 1.39 0.335 6.07, 14.4 0.45
CBA/J f 4.73 1.69   8 0.596 0.357 2.26, 6.97 -1.05
CBA/J m 6.08 1.41   7 0.535 0.233 3.97, 8.32 -1.06
DBA/2J f 7.42 2.49   8 0.882 0.336 3.79, 10.1 -0.09
DBA/2J m 5.14 2.67   7 1.01 0.519 2.4, 9.59 -1.4
FVB/NJ f 4.81 0.669   8 0.237 0.139 4.03, 6.32 -1.02
FVB/NJ m 6.16 1.62   8 0.572 0.263 3.92, 8.85 -1.03
KK/HlJ f 8.88 3.34   7 1.26 0.375 5.34, 15.6 0.43
KK/HlJ m 10.9 2.41   11 0.726 0.222 7.76, 14.9 0.7
LP/J f 12.6 2.6   8 0.919 0.207 9.72, 17.9 1.75
LP/J m 13.4 3.15   7 1.19 0.234 8.79, 18.9 1.61
MRL/MpJ f 4.68 1.22   8 0.432 0.261 3.39, 7.01 -1.07
MRL/MpJ m 5.56 1.16   8 0.411 0.209 3.8, 7.18 -1.25
NOD.B10Sn-H2b/J f 4.53 1.23   8 0.434 0.271 2.78, 5.83 -1.12
NOD.B10Sn-H2b/J m 6.33 0.603   8 0.213 0.0954 5.28, 6.88 -0.97
NON/ShiLtJ f 7.37 1.18   9 0.392 0.16 5.72, 9.26 -0.11
NON/ShiLtJ m 7.74 1.89   7 0.714 0.244 4.36, 9.65 -0.45
NZO/HlLtJ f 8.07 2.71   6 1.11 0.335 4.42, 11.5 0.14
NZO/HlLtJ m 13.1 4.26   5 1.91 0.325 7.79, 17.5 1.5
NZW/LacJ f 11.4 2.5   8 0.884 0.218 7.45, 15.3 1.33
NZW/LacJ m 11.1 0.752   8 0.266 0.0679 10.2, 12.1 0.77
P/J f 5.07 0.842   7 0.318 0.166 3.82, 6.18 -0.93
P/J m 9.36 4.05   3 2.34 0.432 5.88, 13.8 0.14
PL/J f 5.07 1.33   7 0.502 0.262 3.63, 7.67 -0.93
PL/J m 5.73 2.25   9 0.749 0.392 3.35, 10.9 -1.19
PWD/PhJ f 4.61 1.4   8 0.493 0.302 3.14, 7.72 -1.09
PWD/PhJ m 7.01 0.734   8 0.26 0.105 5.74, 8.28 -0.72
RIIIS/J f 5.12 0.54   8 0.191 0.106 4.16, 5.9 -0.91
RIIIS/J m 7.62 1.8   7 0.68 0.236 6.21, 11.5 -0.5
SJL/J f 7.14 4.64   7 1.76 0.651 2.51, 15.6 -0.19
SJL/J m 8.67 3.84   8 1.36 0.443 3.33, 16.7 -0.11
SM/J f 4.43 0.444   8 0.157 0.1 3.82, 5.1 -1.16
SM/J m 6.17 0.578   8 0.204 0.0937 5.24, 6.97 -1.02
SWR/J f 12.7 3.52   7 1.33 0.277 5.74, 16.7 1.79
SWR/J m 6.95 1.67   8 0.591 0.24 4.77, 9.82 -0.74
WSB/EiJ f 5.61 0.79   9 0.263 0.141 4.3, 6.51 -0.74
WSB/EiJ m 8.55 2.2   8 0.779 0.257 5.1, 13.1 -0.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.4762 0.774 7.9979 4.9546
129S1/SvImJ m 6.2871 0.8274 7.9139 4.6604
A/J f 5.6343 0.8274 7.261 4.0075
A/J m 6.025 0.8937 7.7821 4.2679
BALB/cByJ f 6.65 0.8274 8.2768 5.0232
BALB/cByJ m 10.2714 0.8274 11.8982 8.6447
BTBR T+ Itpr3tf/J f 9.8837 0.774 11.4054 8.3621
BTBR T+ Itpr3tf/J m 12.4375 0.774 13.9592 10.9158
BUB/BnJ f 11.5714 0.8274 13.1982 9.9447
BUB/BnJ m 12.8033 0.8937 14.5604 11.0462
C3H/HeJ f 6.3337 0.774 7.8554 4.8121
C3H/HeJ m 8.5 0.774 10.0217 6.9783
C57BL/10J f 10.1744 0.7297 11.6091 8.7398
C57BL/10J m 12.2662 0.774 13.7879 10.7446
C57BL/6J f 9.4086 0.8274 11.0353 7.7818
C57BL/6J m 13.0833 0.8937 14.8404 11.3262
C57BLKS/J f 12.6625 0.774 14.1842 11.1408
C57BLKS/J m 9.8563 0.774 11.3779 8.3346
C57BR/cdJ f 10.9975 0.774 12.5192 9.4758
C57BR/cdJ m 13.2625 0.774 14.7842 11.7408
C57L/J f 6.0638 0.774 7.5854 4.5421
C57L/J m 8.7538 0.774 10.2754 7.2321
CAST/EiJ f 10.1425 0.774 11.6642 8.6208
CAST/EiJ m 10.175 0.8937 11.9321 8.4179
CBA/J f 4.7263 0.774 6.2479 3.2046
CBA/J m 6.0757 0.8274 7.7025 4.449
DBA/2J f 7.4225 0.774 8.9442 5.9008
DBA/2J m 5.1386 0.8274 6.7653 3.5118
FVB/NJ f 4.8137 0.774 6.3354 3.2921
FVB/NJ m 6.155 0.774 7.6767 4.6333
KK/HlJ f 8.8843 0.8274 10.511 7.2575
KK/HlJ m 10.8509 0.6601 12.1486 9.5532
LP/J f 12.5537 0.774 14.0754 11.0321
LP/J m 13.4414 0.8274 15.0682 11.8147
MRL/MpJ f 4.6762 0.774 6.1979 3.1546
MRL/MpJ m 5.5637 0.774 7.0854 4.0421
NOD.B10Sn-H2b/J f 4.5262 0.774 6.0479 3.0046
NOD.B10Sn-H2b/J m 6.3262 0.774 7.8479 4.8046
NON/ShiLtJ f 7.3678 0.7297 8.8024 5.9331
NON/ShiLtJ m 7.7443 0.8274 9.371 6.1175
NZO/HlLtJ f 8.0717 0.8937 9.8288 6.3146
NZO/HlLtJ m 13.118 0.979 15.0428 11.1932
NZW/LacJ f 11.4462 0.774 12.9679 9.9246
NZW/LacJ m 11.075 0.774 12.5967 9.5533
P/J f 5.0657 0.8274 6.6925 3.439
P/J m 9.36 1.2639 11.8449 6.8751
PL/J f 5.0657 0.8274 6.6925 3.439
PL/J m 5.7333 0.7297 7.168 4.2987
PWD/PhJ f 4.6125 0.774 6.1342 3.0908
PWD/PhJ m 7.0112 0.774 8.5329 5.4896
RIIIS/J f 5.1225 0.774 6.6442 3.6008
RIIIS/J m 7.6229 0.8274 9.2496 5.9961
SJL/J f 7.14 0.8274 8.7668 5.5132
SJL/J m 8.6737 0.774 10.1954 7.1521
SM/J f 4.4262 0.774 5.9479 2.9046
SM/J m 6.165 0.774 7.6867 4.6433
SWR/J f 12.7057 0.8274 14.3325 11.079
SWR/J m 6.9525 0.774 8.4742 5.4308
WSB/EiJ f 5.6056 0.7297 7.0402 4.1709
WSB/EiJ m 8.555 0.774 10.0767 7.0333


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.3817 0.5665 7.4955 5.2679
A/J both 5.8296 0.609 7.0269 4.6324
BALB/cByJ both 8.4607 0.5851 9.611 7.3104
BTBR T+ Itpr3tf/J both 11.1606 0.5473 12.2366 10.0846
BUB/BnJ both 12.1874 0.609 13.3846 10.9901
C3H/HeJ both 7.4169 0.5473 8.4929 6.3409
C57BL/10J both 11.2203 0.5319 12.266 10.1747
C57BL/6J both 11.246 0.609 12.4432 10.0487
C57BLKS/J both 11.2594 0.5473 12.3354 10.1834
C57BR/cdJ both 12.13 0.5473 13.206 11.054
C57L/J both 7.4088 0.5473 8.4847 6.3328
CAST/EiJ both 10.1587 0.5911 11.321 8.9965
CBA/J both 5.401 0.5665 6.5147 4.2872
DBA/2J both 6.2805 0.5665 7.3943 5.1668
FVB/NJ both 5.4844 0.5473 6.5604 4.4084
KK/HlJ both 9.8676 0.5292 10.9081 8.8271
LP/J both 12.9976 0.5665 14.1113 11.8838
MRL/MpJ both 5.12 0.5473 6.196 4.044
NOD.B10Sn-H2b/J both 5.4262 0.5473 6.5022 4.3503
NON/ShiLtJ both 7.556 0.5516 8.6405 6.4715
NZO/HlLtJ both 10.5948 0.6628 11.8979 9.2917
NZW/LacJ both 11.2606 0.5473 12.3366 10.1846
P/J both 7.2129 0.7553 8.6979 5.7278
PL/J both 5.3995 0.5516 6.484 4.315
PWD/PhJ both 5.8119 0.5473 6.8879 4.7359
RIIIS/J both 6.3727 0.5665 7.4864 5.2589
SJL/J both 7.9069 0.5665 9.0206 6.7931
SM/J both 5.2956 0.5473 6.3716 4.2196
SWR/J both 9.8291 0.5665 10.9429 8.7153
WSB/EiJ both 7.0803 0.5319 8.126 6.0346




  GWAS USING LINEAR MIXED MODELS