Phenotype measure:   Peters4   WBC_M06

ID, description, units MPD:24301   WBC_M06   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 6mo
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - white blood cell count (WBC; per volume x 103) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means8.53   n/µL 9.12   n/µL
Median of the strain means7.84   n/µL 8.04   n/µL
SD of the strain means± 2.89 ± 3.00
Coefficient of variation (CV)0.339 0.328
Min–max range of strain means3.63   –   16.7   n/µL 5.73   –   16.3   n/µL
Mean sample size per strain7.7   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 49.9475 49.9475 12.8957 0.0004
strain 29 3240.9829 111.758 28.8542 < 0.0001
sex:strain 29 397.4045 13.7036 3.5381 < 0.0001
Residuals 395 1529.9156 3.8732


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 7.76 0.892   8 0.315 0.115 6.79, 9.4 -0.27
129S1/SvImJ m 6.86 1.4   12 0.403 0.204 5.33, 10.6 -0.76
A/J f 8.02 3.74   5 1.67 0.467 4.24, 12.7 -0.18
A/J m 5.73 0.947   8 0.335 0.165 4.29, 7.08 -1.13
BALB/cByJ f 9.63 1.54   6 0.629 0.16 7.49, 11.6 0.38
BALB/cByJ m 8.29 2.0   8 0.708 0.242 5.74, 11.0 -0.28
BTBR T+ Itpr3tf/J f 10.5 1.51   8 0.534 0.143 7.9, 12.2 0.68
BTBR T+ Itpr3tf/J m 10.1 1.49   8 0.526 0.147 8.21, 11.9 0.33
BUB/BnJ f 10.2 1.5   8 0.53 0.147 8.67, 13.4 0.58
BUB/BnJ m 11.6 3.3   7 1.25 0.284 8.01, 17.7 0.83
C3H/HeJ f 7.2 1.19   8 0.421 0.165 5.53, 8.99 -0.46
C3H/HeJ m 6.82 1.07   8 0.38 0.157 5.3, 8.13 -0.77
C57BL/10J f 12.7 2.32   8 0.821 0.182 9.59, 16.0 1.44
C57BL/10J m 15.0 3.3   6 1.35 0.219 10.4, 19.6 1.96
C57BL/6J f 6.3 0.926   8 0.327 0.147 5.07, 8.01 -0.77
C57BL/6J m 12.3 2.5   7 0.944 0.203 8.64, 16.3 1.06
C57BLKS/J f 8.02 2.21   8 0.781 0.275 5.48, 11.1 -0.18
C57BLKS/J m 12.5 2.62   7 0.991 0.209 7.92, 16.7 1.13
C57BR/cdJ f 11.1 2.19   7 0.828 0.197 8.81, 13.9 0.89
C57BR/cdJ m 12.7 1.14   8 0.402 0.0893 11.4, 14.4 1.19
C57L/J f 11.7 1.3   8 0.461 0.112 9.74, 13.2 1.1
C57L/J m 11.8 1.03   8 0.363 0.0869 10.2, 13.3 0.89
CAST/EiJ f 8.6 1.67   10 0.53 0.195 5.85, 10.6 0.03
CAST/EiJ m 6.3 2.84   2   2.01 0.451 4.29, 8.31 -0.94
CBA/J f 5.81 1.09   6 0.446 0.188 4.09, 6.8 -0.94
CBA/J m 7.36 1.36   8 0.482 0.185 4.85, 9.73 -0.59
DBA/2J f 9.48 2.03   7 0.769 0.215 7.72, 13.1 0.33
DBA/2J m 9.77 1.96   7 0.742 0.201 7.65, 13.7 0.22
FVB/NJ f 6.5 1.59   8 0.562 0.245 4.79, 9.57 -0.7
FVB/NJ m 5.84 1.5   7 0.566 0.256 4.06, 8.64 -1.1
KK/HlJ f 7.93 1.42   6 0.579 0.179 5.93, 10.1 -0.21
KK/HlJ m 9.78 2.43   8 0.858 0.248 6.34, 13.5 0.22
LP/J f 16.7 3.91   6 1.6 0.235 13.0, 23.3 2.82
LP/J m 16.3 4.57   8 1.62 0.281 12.3, 26.4 2.39
MRL/MpJ f 3.63 0.914   8 0.323 0.252 2.39, 5.38 -1.69
MRL/MpJ m 6.07 0.762   5 0.341 0.126 5.1, 7.21 -1.02
NOD.B10Sn-H2b/J f 5.74 1.37   8 0.484 0.238 3.11, 7.41 -0.96
NOD.B10Sn-H2b/J m 6.18 1.61   8 0.57 0.261 3.3, 8.11 -0.98
NON/ShiLtJ f 7.21 2.15   8 0.761 0.299 4.28, 11.6 -0.46
NON/ShiLtJ m 7.99 2.08   6 0.849 0.26 5.23, 9.77 -0.38
NZO/HlLtJ f 11.3 1.17   8 0.412 0.103 9.96, 13.6 0.96
NZO/HlLtJ m 8.09 1.63   7 0.618 0.202 6.04, 10.8 -0.35
NZW/LacJ f 13.1 1.94   8 0.687 0.148 11.0, 16.1 1.58
NZW/LacJ m 14.7 2.51   6 1.02 0.17 9.95, 17.0 1.86
P/J f 4.92 1.58   8 0.56 0.322 1.85, 7.07 -1.25
P/J m 8.27 1.87   8 0.661 0.226 5.43, 11.8 -0.29
PL/J f 7.7 1.46   13 0.404 0.189 5.8, 10.8 -0.29
PL/J m 7.23 0.634   8 0.224 0.0878 5.98, 7.95 -0.63
PWD/PhJ f 5.92 1.6   8 0.567 0.271 3.71, 8.74 -0.9
PWD/PhJ m 6.79 1.48   7 0.56 0.218 4.77, 8.84 -0.78
RIIIS/J f 6.32 0.949   8 0.336 0.15 5.22, 7.93 -0.76
RIIIS/J m 7.42 0.772   8 0.273 0.104 6.4, 8.38 -0.57
SJL/J f 12.1 3.14   8 1.11 0.259 5.14, 15.2 1.23
SJL/J m 10.8 3.41   8 1.2 0.315 5.99, 16.4 0.56
SM/J f 6.2 1.37   6 0.56 0.221 4.48, 8.66 -0.8
SM/J m 7.33 0.835   8 0.295 0.114 6.4, 8.72 -0.6
SWR/J f 7.63 3.22   8 1.14 0.422 4.56, 14.6 -0.31
SWR/J m 7.39 2.08   8 0.737 0.282 5.05, 10.8 -0.58
WSB/EiJ f 5.9 1.6   10 0.507 0.272 3.4, 7.99 -0.91
WSB/EiJ m 6.43 1.67   7 0.63 0.259 3.69, 8.3 -0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 7.7563 0.6958 9.1242 6.3883
129S1/SvImJ m 6.8625 0.5681 7.9794 5.7456
A/J f 8.018 0.8801 9.7483 6.2877
A/J m 5.7262 0.6958 7.0942 4.3583
BALB/cByJ f 9.6283 0.8035 11.2079 8.0488
BALB/cByJ m 8.2875 0.6958 9.6555 6.9195
BTBR T+ Itpr3tf/J f 10.5413 0.6958 11.9092 9.1733
BTBR T+ Itpr3tf/J m 10.1363 0.6958 11.5042 8.7683
BUB/BnJ f 10.2125 0.6958 11.5805 8.8445
BUB/BnJ m 11.6443 0.7439 13.1067 10.1819
C3H/HeJ f 7.2025 0.6958 8.5705 5.8345
C3H/HeJ m 6.8188 0.6958 8.1867 5.4508
C57BL/10J f 12.7488 0.6958 14.1167 11.3808
C57BL/10J m 15.0333 0.8035 16.6129 13.4538
C57BL/6J f 6.3013 0.6958 7.6692 4.9333
C57BL/6J m 12.3057 0.7439 13.7681 10.8433
C57BLKS/J f 8.015 0.6958 9.383 6.647
C57BLKS/J m 12.5457 0.7439 14.0081 11.0833
C57BR/cdJ f 11.1386 0.7439 12.601 9.6762
C57BR/cdJ m 12.725 0.6958 14.093 11.357
C57L/J f 11.655 0.6958 13.023 10.287
C57L/J m 11.8375 0.6958 13.2055 10.4695
CAST/EiJ f 8.595 0.6224 9.8185 7.3715
CAST/EiJ m 6.3 1.3916 9.0359 3.5641
CBA/J f 5.81 0.8035 7.3896 4.2304
CBA/J m 7.3638 0.6958 8.7317 5.9958
DBA/2J f 9.4757 0.7439 10.9381 8.0133
DBA/2J m 9.77 0.7439 11.2324 8.3076
FVB/NJ f 6.5025 0.6958 7.8705 5.1345
FVB/NJ m 5.8386 0.7439 7.301 4.3762
KK/HlJ f 7.935 0.8035 9.5146 6.3554
KK/HlJ m 9.78 0.6958 11.148 8.412
LP/J f 16.65 0.8035 18.2296 15.0704
LP/J m 16.275 0.6958 17.643 14.907
MRL/MpJ f 3.6325 0.6958 5.0005 2.2645
MRL/MpJ m 6.07 0.8801 7.8003 4.3397
NOD.B10Sn-H2b/J f 5.7413 0.6958 7.1092 4.3733
NOD.B10Sn-H2b/J m 6.1788 0.6958 7.5467 4.8108
NON/ShiLtJ f 7.2088 0.6958 8.5767 5.8408
NON/ShiLtJ m 7.9917 0.8035 9.5712 6.4121
NZO/HlLtJ f 11.3325 0.6958 12.7005 9.9645
NZO/HlLtJ m 8.0857 0.7439 9.5481 6.6233
NZW/LacJ f 13.1 0.6958 14.468 11.732
NZW/LacJ m 14.7083 0.8035 16.2879 13.1288
P/J f 4.915 0.6958 6.283 3.547
P/J m 8.2675 0.6958 9.6355 6.8995
PL/J f 7.6969 0.5458 8.77 6.6238
PL/J m 7.225 0.6958 8.593 5.857
PWD/PhJ f 5.92 0.6958 7.288 4.552
PWD/PhJ m 6.7914 0.7439 8.2538 5.329
RIIIS/J f 6.3225 0.6958 7.6905 4.9545
RIIIS/J m 7.4238 0.6958 8.7917 6.0558
SJL/J f 12.13 0.6958 13.498 10.762
SJL/J m 10.83 0.6958 12.198 9.462
SM/J f 6.2033 0.8035 7.7829 4.6238
SM/J m 7.3338 0.6958 8.7017 5.9658
SWR/J f 7.6338 0.6958 9.0017 6.2658
SWR/J m 7.3913 0.6958 8.7592 6.0233
WSB/EiJ f 5.901 0.6224 7.1245 4.6775
WSB/EiJ m 6.4286 0.7439 7.891 4.9662


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.3094 0.4491 8.1924 6.4264
A/J both 6.8721 0.561 7.975 5.7692
BALB/cByJ both 8.9579 0.5314 10.0027 7.9131
BTBR T+ Itpr3tf/J both 10.3388 0.492 11.306 9.3715
BUB/BnJ both 10.9284 0.5093 11.9296 9.9272
C3H/HeJ both 7.0106 0.492 7.9779 6.0433
C57BL/10J both 13.891 0.5314 14.9358 12.8463
C57BL/6J both 9.3035 0.5093 10.3047 8.3022
C57BLKS/J both 10.2804 0.5093 11.2816 9.2791
C57BR/cdJ both 11.9318 0.5093 12.933 10.9305
C57L/J both 11.7463 0.492 12.7135 10.779
CAST/EiJ both 7.4475 0.7622 8.946 5.949
CBA/J both 6.5869 0.5314 7.6317 5.5421
DBA/2J both 9.6229 0.526 10.6569 8.5888
FVB/NJ both 6.1705 0.5093 7.1718 5.1693
KK/HlJ both 8.8575 0.5314 9.9023 7.8127
LP/J both 16.4625 0.5314 17.5073 15.4177
MRL/MpJ both 4.8513 0.561 5.9541 3.7484
NOD.B10Sn-H2b/J both 5.96 0.492 6.9273 4.9927
NON/ShiLtJ both 7.6002 0.5314 8.645 6.5554
NZO/HlLtJ both 9.7091 0.5093 10.7103 8.7079
NZW/LacJ both 13.9042 0.5314 14.949 12.8594
P/J both 6.5912 0.492 7.5585 5.624
PL/J both 7.461 0.4422 8.3303 6.5916
PWD/PhJ both 6.3557 0.5093 7.357 5.3545
RIIIS/J both 6.8731 0.492 7.8404 5.9058
SJL/J both 11.48 0.492 12.4473 10.5127
SM/J both 6.7685 0.5314 7.8133 5.7238
SWR/J both 7.5125 0.492 8.4798 6.5452
WSB/EiJ both 6.1648 0.4849 7.1182 5.2114




  GWAS USING LINEAR MIXED MODELS