Project measure / variable:   Yuan2   lifespandays

ID, description, units MPD:23401   lifespandays   lifespan   [d]  
Data set, strains Yuan2   inbred   31 strains     sex: both     age: varies
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Yuan2 - lifespan



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested31 strains28 strains
Mean of the strain means689   d 698   d
Median of the strain means713   d 694   d
SD of the strain means± 107 ± 120
Coefficient of variation (CV)0.155 0.171
Min–max range of strain means462   –   878   d 463   –   894   d
Mean sample size per strain30.8   mice 30.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 61751.8738 61751.8738 1.9382 0.1641
strain 27 20648136.3317 764745.7901 24.003 < 0.0001
sex:strain 27 1364473.1921 50536.0442 1.5862 0.0287
Residuals 1645 52410426.4203 31860.4416


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 787.0 159.0   32 28.1 0.202 483.0, 1099.0 0.92
129S1/SvImJ m 878.0 131.0   32 23.2 0.15 534.0, 1102.0 1.5
A/J f 631.0 130.0   32 23.0 0.206 357.0, 806.0 -0.55
A/J m 613.0 130.0   30 23.7 0.212 252.0, 861.0 -0.71
BALB/cByJ f 734.0 154.0   32 27.3 0.21 301.0, 930.0 0.42
BALB/cByJ m 664.0 202.0   32 35.7 0.304 232.0, 975.0 -0.28
BTBR T+ Itpr3tf/J f 580.0 138.0   32 24.3 0.237 217.0, 877.0 -1.02
BTBR T+ Itpr3tf/J m 592.0 158.0   32 28.0 0.267 350.0, 889.0 -0.89
BUB/BnJ f 611.0 218.0   24 44.6 0.357 266.0, 1034.0 -0.73
BUB/BnJ m 594.0 256.0   24 52.2 0.431 260.0, 1020.0 -0.87
C3H/HeJ f 724.0 131.0   29 24.4 0.182 323.0, 876.0 0.33
C3H/HeJ m 719.0 143.0   32 25.2 0.199 381.0, 966.0 0.17
C57BL/10J f 828.0 231.0   32 40.8 0.279 300.0, 1202.0 1.3
C57BL/10J m 738.0 181.0   25 36.3 0.246 266.0, 936.0 0.33
C57BL/6J f 856.0 185.0   29 34.4 0.217 272.0, 1180.0 1.56
C57BL/6J m 894.0 114.0   32 20.1 0.127 706.0, 1140.0 1.64
C57BLKS/J f 739.0 217.0   32 38.4 0.294 272.0, 987.0 0.47
C57BLKS/J m 838.0 124.0   31 22.2 0.148 378.0, 1076.0 1.17
C57BR/cdJ f 806.0 205.0   32 36.3 0.255 301.0, 1025.0 1.09
C57BR/cdJ m 831.0 135.0   32 23.9 0.163 527.0, 1081.0 1.11
C57L/J f 713.0 80.1   32 14.2 0.112 355.0, 834.0 0.22
C57L/J m 703.0 98.9   32 17.5 0.141 433.0, 839.0 0.04
CAST/EiJ f 664.0 150.0   13 41.7 0.226 389.0, 854.0 -0.24
CBA/J f 623.0 182.0   30 33.2 0.292 266.0, 863.0 -0.62
CBA/J m 647.0 170.0   32 30.0 0.262 332.0, 913.0 -0.43
DBA/2J f 580.0 220.0   32 38.9 0.38 260.0, 917.0 -1.02
DBA/2J m 641.0 179.0   29 33.2 0.279 238.0, 904.0 -0.48
FVB/NJ f 750.0 230.0   26 45.1 0.307 218.0, 1101.0 0.57
FVB/NJ m 632.0 174.0   24 35.5 0.275 253.0, 1079.0 -0.55
KK/HlJ f 592.0 97.8   31 17.6 0.165 366.0, 849.0 -0.91
KK/HlJ m 635.0 135.0   32 23.9 0.212 365.0, 1021.0 -0.53
LP/J f 805.0 189.0   31 33.9 0.234 239.0, 1113.0 1.08
LP/J m 806.0 116.0   32 20.5 0.144 577.0, 1121.0 0.9
MOLF/EiJ f 681.0 170.0   32 30.0 0.249 347.0, 967.0 -0.08
MRL/MpJ f 544.0 111.0   30 20.2 0.204 329.0, 749.0 -1.36
MRL/MpJ m 587.0 131.0   32 23.2 0.223 259.0, 736.0 -0.93
NOD.B10Sn-H2b/J f 648.0 157.0   30 28.6 0.242 311.0, 861.0 -0.39
NOD.B10Sn-H2b/J m 686.0 205.0   30 37.4 0.298 323.0, 983.0 -0.1
NON/ShiLtJ f 721.0 140.0   31 25.1 0.194 295.0, 906.0 0.3
NON/ShiLtJ m 821.0 144.0   32 25.4 0.175 274.0, 987.0 1.03
NZO/HlLtJ f 548.0 188.0   32 33.3 0.344 217.0, 918.0 -1.32
NZO/HlLtJ m 463.0 199.0   31 35.7 0.43 219.0, 855.0 -1.97
NZW/LacJ f 730.0 145.0   32 25.6 0.199 460.0, 1006.0 0.38
NZW/LacJ m 802.0 237.0   32 41.8 0.295 375.0, 1153.0 0.87
P/J f 676.0 179.0   32 31.6 0.265 301.0, 984.0 -0.12
PL/J f 462.0 135.0   32 23.9 0.292 218.0, 750.0 -2.13
PL/J m 471.0 131.0   32 23.2 0.279 245.0, 730.0 -1.9
PWD/PhJ f 807.0 173.0   31 31.1 0.215 434.0, 1071.0 1.1
PWD/PhJ m 743.0 233.0   25 46.7 0.314 205.0, 1012.0 0.38
RIIIS/J f 786.0 109.0   32 19.3 0.139 536.0, 960.0 0.91
RIIIS/J m 847.0 108.0   32 19.1 0.128 596.0, 1022.0 1.25
SJL/J f 490.0 156.0   30 28.4 0.318 266.0, 834.0 -1.87
SJL/J m 510.0 118.0   15 30.6 0.232 227.0, 708.0 -1.57
SM/J f 732.0 146.0   32 25.8 0.199 398.0, 1023.0 0.4
SM/J m 727.0 175.0   31 31.4 0.24 272.0, 896.0 0.24
SWR/J f 641.0 212.0   31 38.0 0.33 233.0, 977.0 -0.45
SWR/J m 655.0 262.0   32 46.3 0.4 226.0, 1098.0 -0.36
WSB/EiJ f 878.0 342.0   31 61.5 0.39 219.0, 1276.0 1.77
WSB/EiJ m 809.0 362.0   32 64.0 0.448 202.0, 1284.0 0.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 787.4063 31.5537 849.296 725.5165
129S1/SvImJ m 877.9688 31.5537 939.8585 816.079
A/J f 630.6563 31.5537 692.546 568.7665
A/J m 612.9667 32.5886 676.8861 549.0472
BALB/cByJ f 734.375 31.5537 796.2647 672.4853
BALB/cByJ m 664.2812 31.5537 726.171 602.3915
BTBR T+ Itpr3tf/J f 579.8125 31.5537 641.7022 517.9228
BTBR T+ Itpr3tf/J m 592.25 31.5537 654.1397 530.3603
BUB/BnJ f 611.25 36.4351 682.7141 539.7859
BUB/BnJ m 593.5 36.4351 664.9641 522.0359
C3H/HeJ f 724.069 33.1457 789.0811 659.0568
C3H/HeJ m 718.5625 31.5537 780.4522 656.6728
C57BL/10J f 828.5 31.5537 890.3897 766.6103
C57BL/10J m 738.16 35.699 808.1802 668.1398
C57BL/6J f 855.6897 33.1457 920.7018 790.6775
C57BL/6J m 894.2813 31.5537 956.171 832.3915
C57BLKS/J f 739.0312 31.5537 800.921 677.1415
C57BLKS/J m 838.1935 32.0586 901.0736 775.3135
C57BR/cdJ f 805.875 31.5537 867.7647 743.9853
C57BR/cdJ m 830.6562 31.5537 892.546 768.7665
C57L/J f 712.625 31.5537 774.5147 650.7353
C57L/J m 703.4062 31.5537 765.296 641.5165
CBA/J f 622.9 32.5886 686.8194 558.9806
CBA/J m 647.4687 31.5537 709.3585 585.579
DBA/2J f 580.1875 31.5537 642.0772 518.2978
DBA/2J m 641.4138 33.1457 706.426 576.4016
FVB/NJ f 750.3077 35.0057 818.9682 681.6472
FVB/NJ m 632.0 36.4351 703.4641 560.5359
KK/HlJ f 592.0645 32.0586 654.9446 529.1845
KK/HlJ m 635.1563 31.5537 697.046 573.2665
LP/J f 805.3871 32.0586 868.2671 742.5071
LP/J m 805.75 31.5537 867.6397 743.8603
MRL/MpJ f 543.7333 32.5886 607.6528 479.8139
MRL/MpJ m 587.0625 31.5537 648.9522 525.1728
NOD.B10Sn-H2b/J f 648.1667 32.5886 712.0861 584.2472
NOD.B10Sn-H2b/J m 685.7333 32.5886 749.6528 621.8139
NON/ShiLtJ f 721.129 32.0586 784.0091 658.249
NON/ShiLtJ m 821.0 31.5537 882.8897 759.1103
NZO/HlLtJ f 547.9062 31.5537 609.796 486.0165
NZO/HlLtJ m 462.7419 32.0586 525.622 399.8619
NZW/LacJ f 729.8438 31.5537 791.7335 667.954
NZW/LacJ m 801.5938 31.5537 863.4835 739.704
PL/J f 462.0 31.5537 523.8897 400.1103
PL/J m 470.8438 31.5537 532.7335 408.954
PWD/PhJ f 806.6774 32.0586 869.5575 743.7974
PWD/PhJ m 743.28 35.699 813.3002 673.2598
RIIIS/J f 785.9688 31.5537 847.8585 724.079
RIIIS/J m 846.7188 31.5537 908.6085 784.829
SJL/J f 489.7667 32.5886 553.6861 425.8472
SJL/J m 510.4667 46.0872 600.8624 420.0709
SM/J f 732.0312 31.5537 793.921 670.1415
SM/J m 727.1935 32.0586 790.0736 664.3135
SWR/J f 640.7419 32.0586 703.622 577.8619
SWR/J m 655.25 31.5537 717.1397 593.3603
WSB/EiJ f 877.5161 32.0586 940.3962 814.6361
WSB/EiJ m 808.6563 31.5537 870.546 746.7665


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 832.6875 22.3119 876.4502 788.9248
A/J both 621.8115 22.6807 666.2975 577.3254
BALB/cByJ both 699.3281 22.3119 743.0908 655.5655
BTBR T+ Itpr3tf/J both 586.0312 22.3119 629.7939 542.2686
BUB/BnJ both 602.375 25.7635 652.9078 551.8422
C3H/HeJ both 721.3157 22.8816 766.1959 676.4356
C57BL/10J both 783.33 23.8226 830.0557 736.6043
C57BL/6J both 874.9855 22.8816 919.8656 830.1053
C57BLKS/J both 788.6124 22.4911 832.7266 744.4982
C57BR/cdJ both 818.2656 22.3119 862.0283 774.503
C57L/J both 708.0156 22.3119 751.7783 664.253
CBA/J both 635.1844 22.6807 679.6704 590.6983
DBA/2J both 610.8006 22.8816 655.6808 565.9205
FVB/NJ both 691.1538 25.2632 740.7053 641.6024
KK/HlJ both 613.6104 22.4911 657.7246 569.4962
LP/J both 805.5685 22.4911 849.6827 761.4544
MRL/MpJ both 565.3979 22.6807 609.884 520.9119
NOD.B10Sn-H2b/J both 666.95 23.0436 712.1479 621.7521
NON/ShiLtJ both 771.0645 22.4911 815.1787 726.9503
NZO/HlLtJ both 505.3241 22.4911 549.4383 461.2099
NZW/LacJ both 765.7188 22.3119 809.4814 721.9561
PL/J both 466.4219 22.3119 510.1845 422.6592
PWD/PhJ both 774.9787 23.9905 822.0338 727.9236
RIIIS/J both 816.3438 22.3119 860.1064 772.5811
SJL/J both 500.1167 28.2225 555.4725 444.7608
SM/J both 729.6124 22.4911 773.7266 685.4982
SWR/J both 647.996 22.4911 692.1101 603.8818
WSB/EiJ both 843.0862 22.4911 887.2004 798.972




  GWAS USING LINEAR MIXED MODELS