Project measure / variable:   Jaxpheno4   MCH8

ID, description, units MPD:22982   MCH8   mean RBC corpuscular hemoglobin content (MCH)   [pg]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - mean RBC corpuscular hemoglobin content (MCH) at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means15.7   pg 15.6   pg
Median of the strain means15.8   pg 15.8   pg
SD of the strain means± 0.947 ± 0.839
Coefficient of variation (CV)0.0602 0.0538
Min–max range of strain means13.5   –   17.3   pg 13.6   –   16.6   pg
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.2149 1.2149 5.1548 0.0237
strain 10 311.6847 31.1685 132.245 < 0.0001
sex:strain 10 8.8709 0.8871 3.7638 0.0001
Residuals 386 90.9753 0.2357


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 15.5 0.202   10 0.064 0.0131 15.1, 15.7 -0.25
B6.129P2-Apoetm1Unc/J m 15.6 0.137   10 0.0433 0.00878 15.4, 15.8 0.0
B6D2F1/J f 15.2 0.151   10 0.0477 0.00996 15.0, 15.4 -0.57
B6D2F1/J m 15.1 0.587   12 0.169 0.0388 14.6, 16.8 -0.6
BALB/cByJ f 15.8 0.177   21 0.0386 0.0112 15.5, 16.1 0.07
BALB/cByJ m 15.9 0.389   20 0.0869 0.0244 15.4, 16.6 0.36
BALB/cJ f 16.1 0.232   22 0.0495 0.0144 15.8, 16.7 0.38
BALB/cJ m 16.2 0.602   21 0.131 0.0372 14.3, 16.8 0.72
C3H/HeJ f 16.6 0.171   13 0.0474 0.0103 16.3, 16.8 0.91
C3H/HeJ m 16.2 0.275   11 0.0829 0.017 15.8, 16.6 0.72
C57BL/6J f 15.8 0.682   42 0.105 0.043 15.2, 18.6 0.07
C57BL/6J m 15.3 0.775   34 0.133 0.0505 12.5, 18.6 -0.36
CBA/J f 15.6 0.458   21 0.0999 0.0293 14.3, 16.2 -0.14
CBA/J m 15.8 0.385   23 0.0802 0.0244 14.7, 16.2 0.24
DBA/2J f 13.5 0.352   23 0.0733 0.026 12.7, 14.0 -2.36
DBA/2J m 13.6 0.192   20 0.0429 0.0141 13.3, 14.1 -2.38
FVB/NJ f 15.5 0.114   11 0.0343 0.00733 15.4, 15.7 -0.25
FVB/NJ m 15.0 0.955   14 0.255 0.0635 12.2, 15.7 -0.72
NOD.CB17-Prkdcscid/J f 16.2 0.266   11 0.0803 0.0164 15.7, 16.7 0.49
NOD.CB17-Prkdcscid/J m 16.3 0.37   12 0.107 0.0227 15.7, 17.1 0.83
NOD/ShiLtJ f 17.3 0.197   21 0.0429 0.0114 16.9, 17.5 1.65
NOD/ShiLtJ m 16.6 0.591   26 0.116 0.0355 13.9, 17.2 1.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 15.51 0.1535 15.8118 15.2082
B6.129P2-Apoetm1Unc/J m 15.61 0.1535 15.9118 15.3082
B6D2F1/J f 15.15 0.1535 15.4518 14.8482
B6D2F1/J m 15.1083 0.1401 15.3839 14.8328
BALB/cByJ f 15.7667 0.1059 15.975 15.5584
BALB/cByJ m 15.905 0.1086 16.1184 15.6916
BALB/cJ f 16.1364 0.1035 16.3399 15.9329
BALB/cJ m 16.1857 0.1059 16.394 15.9774
C3H/HeJ f 16.5615 0.1346 16.8263 16.2968
C3H/HeJ m 16.2182 0.1464 16.506 15.9304
C57BL/6J f 15.8381 0.0749 15.9854 15.6908
C57BL/6J m 15.35 0.0833 15.5137 15.1863
CBA/J f 15.6381 0.1059 15.8464 15.4298
CBA/J m 15.7609 0.1012 15.9599 15.5618
DBA/2J f 13.5 0.1012 13.699 13.301
DBA/2J m 13.61 0.1086 13.8234 13.3966
FVB/NJ f 15.4909 0.1464 15.7787 15.2031
FVB/NJ m 15.0357 0.1297 15.2908 14.7806
NOD.CB17-Prkdcscid/J f 16.2091 0.1464 16.4969 15.9213
NOD.CB17-Prkdcscid/J m 16.3083 0.1401 16.5839 16.0328
NOD/ShiLtJ f 17.2524 0.1059 17.4607 17.0441
NOD/ShiLtJ m 16.65 0.0952 16.8372 16.4628


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 15.56 0.1086 15.7734 15.3466
B6D2F1/J both 15.1292 0.1039 15.3335 14.9248
BALB/cByJ both 15.8358 0.0758 15.9849 15.6867
BALB/cJ both 16.161 0.0741 16.3066 16.0154
C3H/HeJ both 16.3899 0.0994 16.5854 16.1943
C57BL/6J both 15.594 0.056 15.7041 15.4839
CBA/J both 15.6995 0.0733 15.8435 15.5554
DBA/2J both 13.555 0.0742 13.7009 13.4091
FVB/NJ both 15.2633 0.0978 15.4556 15.071
NOD.CB17-Prkdcscid/J both 16.2587 0.1013 16.4579 16.0595
NOD/ShiLtJ both 16.9512 0.0712 17.0912 16.8112




  GWAS USING LINEAR MIXED MODELS