Project measure / variable:   Jaxpheno4   HGB8

ID, description, units MPD:22975   HGB8   hemoglobin (HGB)   [g/dL]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - hemoglobin (HGB) at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means16.2   g/dL 16.5   g/dL
Median of the strain means16.2   g/dL 16.3   g/dL
SD of the strain means± 0.717 ± 0.599
Coefficient of variation (CV)0.0444 0.0363
Min–max range of strain means15.2   –   17.1   g/dL 15.3   –   17.3   g/dL
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.0246 6.0246 12.2561 0.0005
strain 10 131.0298 13.103 26.656 < 0.0001
sex:strain 10 32.8945 3.2894 6.6919 < 0.0001
Residuals 386 189.7415 0.4916


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 16.2 0.393   10 0.124 0.0242 15.7, 16.8 0.06
B6.129P2-Apoetm1Unc/J m 16.2 0.388   10 0.123 0.0239 15.6, 16.9 -0.49
B6D2F1/J f 16.7 0.369   10 0.117 0.022 16.3, 17.5 0.76
B6D2F1/J m 17.0 0.342   12 0.0987 0.0201 16.4, 17.5 0.85
BALB/cByJ f 16.6 0.445   21 0.0971 0.0268 15.9, 17.5 0.62
BALB/cByJ m 17.1 0.438   20 0.098 0.0256 16.3, 17.8 1.02
BALB/cJ f 17.1 0.543   22 0.116 0.0318 16.1, 18.1 1.32
BALB/cJ m 17.3 1.11   21 0.243 0.0642 14.7, 18.7 1.35
C3H/HeJ f 15.7 0.376   13 0.104 0.0239 15.2, 16.6 -0.63
C3H/HeJ m 16.4 0.45   11 0.136 0.0275 15.5, 17.1 -0.15
C57BL/6J f 17.0 0.36   42 0.0556 0.0211 16.3, 17.7 1.18
C57BL/6J m 16.2 0.762   34 0.131 0.0469 13.1, 17.7 -0.49
CBA/J f 15.3 1.1   21 0.24 0.0718 11.4, 16.3 -1.19
CBA/J m 16.2 0.826   23 0.172 0.051 13.1, 17.2 -0.49
DBA/2J f 15.7 0.986   23 0.206 0.0629 13.0, 17.0 -0.63
DBA/2J m 16.3 0.681   20 0.152 0.0418 14.6, 17.3 -0.32
FVB/NJ f 15.2 0.496   11 0.149 0.0326 14.3, 15.8 -1.33
FVB/NJ m 16.2 1.41   14 0.378 0.0874 12.6, 17.9 -0.49
NOD.CB17-Prkdcscid/J f 15.4 0.274   11 0.0825 0.0178 15.0, 15.8 -1.05
NOD.CB17-Prkdcscid/J m 15.3 0.317   12 0.0916 0.0207 14.9, 15.9 -1.99
NOD/ShiLtJ f 16.8 0.395   21 0.0862 0.0235 15.9, 17.4 0.9
NOD/ShiLtJ m 17.2 0.77   26 0.151 0.0448 14.4, 18.1 1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 16.21 0.2217 16.6459 15.7741
B6.129P2-Apoetm1Unc/J m 16.22 0.2217 16.6559 15.7841
B6D2F1/J f 16.74 0.2217 17.1759 16.3041
B6D2F1/J m 17.0333 0.2024 17.4313 16.6354
BALB/cByJ f 16.5905 0.153 16.8913 16.2897
BALB/cByJ m 17.15 0.1568 17.4582 16.8418
BALB/cJ f 17.0909 0.1495 17.3848 16.797
BALB/cJ m 17.3381 0.153 17.6389 17.0373
C3H/HeJ f 15.7154 0.1945 16.0977 15.3331
C3H/HeJ m 16.4091 0.2114 16.8247 15.9935
C57BL/6J f 17.0381 0.1082 17.2508 16.8254
C57BL/6J m 16.2382 0.1202 16.4746 16.0018
CBA/J f 15.3238 0.153 15.6246 15.023
CBA/J m 16.1913 0.1462 16.4787 15.9039
DBA/2J f 15.6826 0.1462 15.97 15.3952
DBA/2J m 16.29 0.1568 16.5982 15.9818
FVB/NJ f 15.1818 0.2114 15.5974 14.7662
FVB/NJ m 16.1714 0.1874 16.5398 15.803
NOD.CB17-Prkdcscid/J f 15.3909 0.2114 15.8065 14.9753
NOD.CB17-Prkdcscid/J m 15.3333 0.2024 15.7313 14.9354
NOD/ShiLtJ f 16.7905 0.153 17.0913 16.4897
NOD/ShiLtJ m 17.1923 0.1375 17.4626 16.922


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 16.215 0.1568 16.5232 15.9068
B6D2F1/J both 16.8867 0.1501 17.1818 16.5916
BALB/cByJ both 16.8702 0.1095 17.0856 16.6549
BALB/cJ both 17.2145 0.1069 17.4248 17.0042
C3H/HeJ both 16.0622 0.1436 16.3446 15.7799
C57BL/6J both 16.6382 0.0809 16.7972 16.4792
CBA/J both 15.7576 0.1058 15.9656 15.5495
DBA/2J both 15.9863 0.1072 16.197 15.7756
FVB/NJ both 15.6766 0.1412 15.9543 15.3989
NOD.CB17-Prkdcscid/J both 15.3621 0.1463 15.6498 15.0744
NOD/ShiLtJ both 16.9914 0.1029 17.1936 16.7892




  GWAS USING LINEAR MIXED MODELS