Project measure / variable:   Jaxpheno4   pct_Retic8

ID, description, units MPD:22962   pct_Retic8   reticulocyte differential   [%]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - reticulocyte differential at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means3.51   % 3.33   %
Median of the strain means3.18   % 3.45   %
SD of the strain means± 0.686 ± 0.554
Coefficient of variation (CV)0.195 0.167
Min–max range of strain means2.56   –   4.56   % 2.58   –   4.09   %
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.632 1.632 4.1183 0.0431
strain 10 123.6195 12.3619 31.195 < 0.0001
sex:strain 10 15.3428 1.5343 3.8717 0.0001
Residuals 386 152.9642 0.3963


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 3.04 0.299   10 0.0945 0.0983 2.6, 3.5 -0.69
B6.129P2-Apoetm1Unc/J m 3.59 0.39   10 0.123 0.109 3.1, 4.2 0.47
B6D2F1/J f 3.16 1.34   10 0.425 0.425 1.3, 4.8 -0.51
B6D2F1/J m 2.75 0.315   12 0.0909 0.114 2.3, 3.5 -1.04
BALB/cByJ f 3.05 0.657   21 0.143 0.216 1.7, 4.3 -0.67
BALB/cByJ m 2.92 0.294   20 0.0658 0.101 2.4, 3.6 -0.74
BALB/cJ f 3.18 0.616   22 0.131 0.194 2.1, 4.1 -0.48
BALB/cJ m 2.8 0.659   21 0.144 0.235 1.8, 5.2 -0.95
C3H/HeJ f 3.54 0.916   13 0.254 0.259 2.6, 5.7 0.04
C3H/HeJ m 4.01 0.266   11 0.0803 0.0664 3.6, 4.5 1.23
C57BL/6J f 3.61 0.6   42 0.0925 0.166 2.4, 4.6 0.14
C57BL/6J m 3.79 0.534   34 0.0916 0.141 3.1, 5.4 0.84
CBA/J f 3.02 0.854   21 0.186 0.283 1.2, 4.4 -0.72
CBA/J m 2.87 0.321   23 0.067 0.112 2.2, 3.5 -0.83
DBA/2J f 2.56 1.24   23 0.259 0.485 1.0, 5.2 -1.39
DBA/2J m 2.58 0.414   20 0.0925 0.16 1.9, 3.5 -1.35
FVB/NJ f 4.44 0.301   11 0.0907 0.0678 3.8, 4.9 1.35
FVB/NJ m 3.75 0.407   14 0.109 0.109 3.2, 4.4 0.76
NOD.CB17-Prkdcscid/J f 4.47 0.441   11 0.133 0.0985 3.9, 5.3 1.4
NOD.CB17-Prkdcscid/J m 3.45 0.254   12 0.0733 0.0736 3.1, 3.8 0.22
NOD/ShiLtJ f 4.56 0.652   21 0.142 0.143 3.0, 6.2 1.53
NOD/ShiLtJ m 4.09 0.363   26 0.0712 0.0888 3.3, 5.0 1.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 3.04 0.1991 3.4314 2.6486
B6.129P2-Apoetm1Unc/J m 3.59 0.1991 3.9814 3.1986
B6D2F1/J f 3.16 0.1991 3.5514 2.7686
B6D2F1/J m 2.75 0.1817 3.1073 2.3927
BALB/cByJ f 3.0476 0.1374 3.3177 2.7775
BALB/cByJ m 2.915 0.1408 3.1918 2.6382
BALB/cJ f 3.1773 0.1342 3.4411 2.9134
BALB/cJ m 2.8048 0.1374 3.0748 2.5347
C3H/HeJ f 3.5385 0.1746 3.8817 3.1952
C3H/HeJ m 4.0091 0.1898 4.3823 3.6359
C57BL/6J f 3.6071 0.0971 3.7981 3.4162
C57BL/6J m 3.7882 0.108 4.0005 3.576
CBA/J f 3.019 0.1374 3.2891 2.749
CBA/J m 2.8696 0.1313 3.1276 2.6115
DBA/2J f 2.5609 0.1313 2.8189 2.3028
DBA/2J m 2.58 0.1408 2.8568 2.3032
FVB/NJ f 4.4364 0.1898 4.8095 4.0632
FVB/NJ m 3.75 0.1682 4.0808 3.4192
NOD.CB17-Prkdcscid/J f 4.4727 0.1898 4.8459 4.0995
NOD.CB17-Prkdcscid/J m 3.45 0.1817 3.8073 3.0927
NOD/ShiLtJ f 4.5619 0.1374 4.832 4.2918
NOD/ShiLtJ m 4.0923 0.1235 4.335 3.8496


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 3.315 0.1408 3.5918 3.0382
B6D2F1/J both 2.955 0.1348 3.22 2.69
BALB/cByJ both 2.9813 0.0983 3.1747 2.788
BALB/cJ both 2.991 0.096 3.1798 2.8022
C3H/HeJ both 3.7738 0.1289 4.0273 3.5203
C57BL/6J both 3.6977 0.0726 3.8405 3.5549
CBA/J both 2.9443 0.095 3.1311 2.7575
DBA/2J both 2.5704 0.0962 2.7596 2.3812
FVB/NJ both 4.0932 0.1268 4.3425 3.8438
NOD.CB17-Prkdcscid/J both 3.9614 0.1314 4.2197 3.703
NOD/ShiLtJ both 4.3271 0.0923 4.5087 4.1455




  GWAS USING LINEAR MIXED MODELS