Project measure / variable:   Jaxpheno4   PLT8

ID, description, units MPD:22950   PLT8   platelet count (PLT; units per volume x 103)   [n/µL]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - platelet count (PLT; units per volume x 103) at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means1030   n/µL 1094   n/µL
Median of the strain means1019   n/µL 1143   n/µL
SD of the strain means± 106 ± 150
Coefficient of variation (CV)0.103 0.137
Min–max range of strain means911   –   1302   n/µL 802   –   1300   n/µL
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 476340.0011 476340.0011 14.0727 0.0002
strain 10 4392254.2043 439225.4204 12.9762 < 0.0001
sex:strain 10 1005376.7956 100537.6796 2.9702 0.0013
Residuals 386 13065504.3299 33848.4568


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 911.0 125.0   10 39.4 0.137 733.0, 1131.0 -1.12
B6.129P2-Apoetm1Unc/J m 992.0 202.0   10 63.9 0.204 623.0, 1251.0 -0.68
B6D2F1/J f 1091.0 146.0   10 46.1 0.134 843.0, 1333.0 0.57
B6D2F1/J m 1179.0 145.0   12 41.8 0.123 957.0, 1494.0 0.57
BALB/cByJ f 956.0 188.0   21 41.0 0.196 556.0, 1281.0 -0.7
BALB/cByJ m 1041.0 161.0   20 36.1 0.155 665.0, 1262.0 -0.35
BALB/cJ f 1001.0 160.0   22 34.2 0.16 670.0, 1260.0 -0.27
BALB/cJ m 994.0 202.0   21 44.0 0.203 548.0, 1322.0 -0.67
C3H/HeJ f 1041.0 215.0   13 59.6 0.206 675.0, 1363.0 0.1
C3H/HeJ m 1143.0 93.9   11 28.3 0.0821 959.0, 1327.0 0.33
C57BL/6J f 1019.0 236.0   42 36.4 0.232 489.0, 1733.0 -0.1
C57BL/6J m 1157.0 123.0   34 21.1 0.107 913.0, 1495.0 0.42
CBA/J f 979.0 208.0   21 45.4 0.212 368.0, 1297.0 -0.48
CBA/J m 956.0 171.0   23 35.6 0.179 670.0, 1314.0 -0.92
DBA/2J f 927.0 197.0   23 41.1 0.213 571.0, 1299.0 -0.97
DBA/2J m 802.0 226.0   20 50.6 0.282 521.0, 1418.0 -1.95
FVB/NJ f 1302.0 127.0   11 38.4 0.0978 1122.0, 1500.0 2.56
FVB/NJ m 1260.0 177.0   14 47.4 0.141 936.0, 1644.0 1.11
NOD.CB17-Prkdcscid/J f 1037.0 219.0   11 66.1 0.212 500.0, 1297.0 0.07
NOD.CB17-Prkdcscid/J m 1300.0 212.0   12 61.3 0.163 983.0, 1675.0 1.38
NOD/ShiLtJ f 1066.0 156.0   21 34.0 0.146 750.0, 1388.0 0.34
NOD/ShiLtJ m 1206.0 177.0   26 34.7 0.147 708.0, 1471.0 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 911.2 58.1794 1025.5882 796.8118
B6.129P2-Apoetm1Unc/J m 992.0 58.1794 1106.3882 877.6118
B6D2F1/J f 1090.6 58.1794 1204.9882 976.2118
B6D2F1/J m 1179.0833 53.1103 1283.505 1074.6616
BALB/cByJ f 956.0476 40.1476 1034.983 877.1122
BALB/cByJ m 1040.55 41.1391 1121.4347 959.6653
BALB/cJ f 1001.4545 39.2246 1078.5751 924.334
BALB/cJ m 993.6667 40.1476 1072.6021 914.7313
C3H/HeJ f 1041.3077 51.0267 1141.6328 940.9826
C3H/HeJ m 1143.4545 55.4719 1252.5195 1034.3896
C57BL/6J f 1019.0952 28.3887 1074.911 963.2795
C57BL/6J m 1157.4706 31.5522 1219.5063 1095.4349
CBA/J f 979.1905 40.1476 1058.1259 900.2551
CBA/J m 955.8261 38.3624 1031.2515 880.4007
DBA/2J f 926.6087 38.3624 1002.0341 851.1833
DBA/2J m 801.95 41.1391 882.8347 721.0653
FVB/NJ f 1302.4545 55.4719 1411.5195 1193.3896
FVB/NJ m 1260.1429 49.1706 1356.8186 1163.4671
NOD.CB17-Prkdcscid/J f 1036.5455 55.4719 1145.6104 927.4805
NOD.CB17-Prkdcscid/J m 1300.0833 53.1103 1404.505 1195.6616
NOD/ShiLtJ f 1065.7143 40.1476 1144.6497 986.7789
NOD/ShiLtJ m 1205.5385 36.0813 1276.479 1134.5979


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 951.6 41.1391 1032.4847 870.7153
B6D2F1/J both 1134.8417 39.3877 1212.2829 1057.4005
BALB/cByJ both 998.2988 28.7413 1054.8079 941.7897
BALB/cJ both 997.5606 28.0642 1052.7384 942.3828
C3H/HeJ both 1092.3811 37.6857 1166.4761 1018.2861
C57BL/6J both 1088.2829 21.2218 1130.0077 1046.5581
CBA/J both 967.5083 27.7647 1022.0972 912.9194
DBA/2J both 864.2793 28.1251 919.577 808.9817
FVB/NJ both 1281.2987 37.0637 1354.1708 1208.4266
NOD.CB17-Prkdcscid/J both 1168.3144 38.3987 1243.8112 1092.8176
NOD/ShiLtJ both 1135.6264 26.9893 1188.6909 1082.5619




  GWAS USING LINEAR MIXED MODELS