Project measure / variable:   Jaxpheno4   pct_LYMPH8

ID, description, units MPD:22932   pct_LYMPH8   lymphocyte differential (LYM; percentage of total WBC)   [%]  at age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - lymphocyte differential (LYM; percentage of total WBC) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means75.6   % 70.7   %
Median of the strain means80.6   % 73.3   %
SD of the strain means± 15.0 ± 15.2
Coefficient of variation (CV)0.198 0.215
Min–max range of strain means34.4   –   88.6   % 27.7   –   83.4   %
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3862.291 3862.291 73.0262 < 0.0001
strain 10 58160.4747 5816.0475 109.9668 < 0.0001
sex:strain 10 1677.3479 167.7348 3.1714 0.0006
Residuals 386 20415.1964 52.8891


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 81.6 4.23   10 1.34 0.0519 75.5, 87.4 0.4
B6.129P2-Apoetm1Unc/J m 76.0 5.35   10 1.69 0.0703 67.6, 84.3 0.35
B6D2F1/J f 83.8 2.78   10 0.88 0.0332 78.9, 87.7 0.55
B6D2F1/J m 83.4 4.06   12 1.17 0.0486 77.9, 91.8 0.84
BALB/cByJ f 80.7 3.81   21 0.832 0.0473 71.5, 85.3 0.34
BALB/cByJ m 71.9 4.61   20 1.03 0.0641 64.3, 80.8 0.08
BALB/cJ f 80.6 3.75   22 0.799 0.0465 71.8, 86.9 0.34
BALB/cJ m 71.9 9.82   21 2.14 0.137 45.2, 84.8 0.08
C3H/HeJ f 73.3 3.23   13 0.897 0.0441 66.1, 76.8 -0.15
C3H/HeJ m 70.7 4.64   11 1.4 0.0656 62.2, 78.9 0.0
C57BL/6J f 88.6 3.08   42 0.476 0.0348 80.3, 93.7 0.87
C57BL/6J m 76.7 16.5   34 2.83 0.215 30.9, 92.3 0.4
CBA/J f 79.9 5.09   21 1.11 0.0637 70.9, 88.3 0.29
CBA/J m 76.9 6.05   23 1.26 0.0786 67.5, 88.9 0.41
DBA/2J f 76.0 6.26   23 1.3 0.0823 56.0, 82.5 0.03
DBA/2J m 73.3 4.55   20 1.02 0.0621 61.5, 78.4 0.17
FVB/NJ f 86.0 4.5   11 1.36 0.0523 74.8, 90.1 0.7
FVB/NJ m 83.2 7.15   14 1.91 0.0859 69.9, 93.3 0.82
NOD.CB17-Prkdcscid/J f 34.4 9.42   11 2.84 0.274 21.5, 58.1 -2.75
NOD.CB17-Prkdcscid/J m 27.7 5.76   12 1.66 0.208 20.4, 39.8 -2.83
NOD/ShiLtJ f 66.4 7.95   21 1.73 0.12 51.3, 76.5 -0.61
NOD/ShiLtJ m 65.8 6.81   26 1.34 0.104 48.3, 77.6 -0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 81.58 2.2998 86.1016 77.0584
B6.129P2-Apoetm1Unc/J m 76.05 2.2998 80.5716 71.5284
B6D2F1/J f 83.81 2.2998 88.3316 79.2884
B6D2F1/J m 83.4167 2.0994 87.5443 79.289
BALB/cByJ f 80.681 1.587 83.8012 77.5607
BALB/cByJ m 71.89 1.6262 75.0873 68.6927
BALB/cJ f 80.6318 1.5505 83.6803 77.5833
BALB/cJ m 71.8905 1.587 75.0107 68.7703
C3H/HeJ f 73.2846 2.017 77.2503 69.3189
C3H/HeJ m 70.6727 2.1927 74.9839 66.3615
C57BL/6J f 88.6429 1.1222 90.8492 86.4365
C57BL/6J m 76.7 1.2472 79.1522 74.2478
CBA/J f 79.881 1.587 83.0012 76.7607
CBA/J m 76.9304 1.5164 79.9119 73.949
DBA/2J f 76.0 1.5164 78.9815 73.0185
DBA/2J m 73.255 1.6262 76.4523 70.0577
FVB/NJ f 86.0091 2.1927 90.3203 81.6979
FVB/NJ m 83.2214 1.9437 87.0429 79.4
NOD.CB17-Prkdcscid/J f 34.3636 2.1927 38.6748 30.0524
NOD.CB17-Prkdcscid/J m 27.7 2.0994 31.8277 23.5723
NOD/ShiLtJ f 66.3714 1.587 69.4917 63.2512
NOD/ShiLtJ m 65.7808 1.4263 68.585 62.9766


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 78.815 1.6262 82.0123 75.6177
B6D2F1/J both 83.6133 1.5569 86.6745 80.5522
BALB/cByJ both 76.2855 1.1361 78.5192 74.0517
BALB/cJ both 76.2611 1.1093 78.4423 74.08
C3H/HeJ both 71.9787 1.4897 74.9076 69.0498
C57BL/6J both 82.6714 0.8389 84.3208 81.0221
CBA/J both 78.4057 1.0975 80.5635 76.2479
DBA/2J both 74.6275 1.1118 76.8134 72.4416
FVB/NJ both 84.6153 1.4651 87.4958 81.7347
NOD.CB17-Prkdcscid/J both 31.0318 1.5179 34.0161 28.0475
NOD/ShiLtJ both 66.0761 1.0669 68.1737 63.9785




  GWAS USING LINEAR MIXED MODELS