Project measure / variable:   Jaxpheno4   pct_NEUT8

ID, description, units MPD:22930   pct_NEUT8   neutrophil differential (NEUT; percentage of total WBC)   [%]  at age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - neutrophil differential (NEUT; percentage of total WBC) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means18.3   % 23.0   %
Median of the strain means15.5   % 20.4   %
SD of the strain means± 11.4 ± 11.8
Coefficient of variation (CV)0.626 0.513
Min–max range of strain means7.35   –   48.7   % 11.9   –   55.8   %
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3134.1189 3134.1189 70.3528 < 0.0001
strain 10 34595.0097 3459.501 77.6568 < 0.0001
sex:strain 10 1481.5894 148.1589 3.3258 0.0004
Residuals 386 17195.7549 44.5486


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 12.7 3.65   10 1.16 0.288 8.1, 17.7 -0.49
B6.129P2-Apoetm1Unc/J m 19.6 4.79   10 1.51 0.244 12.7, 27.8 -0.29
B6D2F1/J f 10.3 2.05   10 0.649 0.198 6.9, 13.4 -0.7
B6D2F1/J m 11.9 2.6   12 0.75 0.219 5.6, 14.8 -0.94
BALB/cByJ f 15.5 3.52   21 0.768 0.227 11.7, 24.4 -0.24
BALB/cByJ m 22.2 4.4   20 0.984 0.198 14.5, 31.2 -0.06
BALB/cJ f 14.8 3.22   22 0.687 0.217 9.8, 21.9 -0.3
BALB/cJ m 23.1 8.45   21 1.84 0.366 12.4, 48.1 0.01
C3H/HeJ f 21.5 3.31   13 0.919 0.154 16.3, 28.2 0.28
C3H/HeJ m 24.3 4.14   11 1.25 0.171 16.7, 32.3 0.11
C57BL/6J f 7.35 2.56   42 0.394 0.348 4.6, 17.1 -0.95
C57BL/6J m 18.5 15.6   34 2.68 0.843 5.0, 63.3 -0.38
CBA/J f 15.8 4.35   21 0.949 0.275 8.0, 22.5 -0.22
CBA/J m 17.7 4.46   23 0.93 0.252 8.5, 26.3 -0.45
DBA/2J f 18.9 5.93   23 1.24 0.315 13.3, 38.0 0.05
DBA/2J m 20.4 3.6   20 0.804 0.176 13.3, 28.7 -0.22
FVB/NJ f 9.56 3.1   11 0.933 0.324 6.8, 16.4 -0.76
FVB/NJ m 12.7 6.83   14 1.83 0.537 4.1, 25.6 -0.87
NOD.CB17-Prkdcscid/J f 48.7 8.88   11 2.68 0.182 30.0, 65.8 2.66
NOD.CB17-Prkdcscid/J m 55.8 7.72   12 2.23 0.138 40.6, 68.0 2.79
NOD/ShiLtJ f 25.9 7.56   21 1.65 0.292 14.6, 42.3 0.67
NOD/ShiLtJ m 26.4 5.52   26 1.08 0.209 18.4, 35.9 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 12.69 2.1107 16.8398 8.5402
B6.129P2-Apoetm1Unc/J m 19.58 2.1107 23.7298 15.4302
B6D2F1/J f 10.35 2.1107 14.4998 6.2002
B6D2F1/J m 11.8667 1.9268 15.6549 8.0784
BALB/cByJ f 15.4762 1.4565 18.3398 12.6125
BALB/cByJ m 22.215 1.4925 25.1494 19.2806
BALB/cJ f 14.8273 1.423 17.6251 12.0295
BALB/cJ m 23.0952 1.4565 25.9589 20.2316
C3H/HeJ f 21.5462 1.8512 25.1858 17.9065
C3H/HeJ m 24.2636 2.0124 28.2203 20.3069
C57BL/6J f 7.3524 1.0299 9.3773 5.3275
C57BL/6J m 18.5059 1.1447 20.7564 16.2553
CBA/J f 15.8238 1.4565 18.6875 12.9602
CBA/J m 17.6913 1.3917 20.4276 14.955
DBA/2J f 18.8522 1.3917 21.5885 16.1159
DBA/2J m 20.43 1.4925 23.3644 17.4956
FVB/NJ f 9.5636 2.0124 13.5203 5.6069
FVB/NJ m 12.7286 1.7838 16.2358 9.2213
NOD.CB17-Prkdcscid/J f 48.7364 2.0124 52.6931 44.7797
NOD.CB17-Prkdcscid/J m 55.8333 1.9268 59.6216 52.0451
NOD/ShiLtJ f 25.8714 1.4565 28.7351 23.0078
NOD/ShiLtJ m 26.3692 1.309 28.9428 23.7956


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 16.135 1.4925 19.0694 13.2006
B6D2F1/J both 11.1083 1.4289 13.9178 8.2989
BALB/cByJ both 18.8456 1.0427 20.8957 16.7955
BALB/cJ both 18.9613 1.0181 20.963 16.9595
C3H/HeJ both 22.9049 1.3672 25.5929 20.2169
C57BL/6J both 12.9291 0.7699 14.4428 11.4154
CBA/J both 16.7576 1.0073 18.738 14.7772
DBA/2J both 19.6411 1.0203 21.6472 17.635
FVB/NJ both 11.1461 1.3446 13.7898 8.5024
NOD.CB17-Prkdcscid/J both 52.2848 1.393 55.0237 49.546
NOD/ShiLtJ both 26.1203 0.9791 28.0454 24.1952




  GWAS USING LINEAR MIXED MODELS