Project measure / variable:   Jaxpheno4   EOS16

ID, description, units MPD:22917   EOS16   eosinophil count (EOS; units per volume x 103)   [n/µL]  at age 16wks  
Data set, strains Jaxpheno4   inbred   9 strains     sex: both     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - eosinophil count (EOS; units per volume x 103) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.0859   n/µL 0.0662   n/µL
Median of the strain means0.0819   n/µL 0.0600   n/µL
SD of the strain means± 0.0205 ± 0.0186
Coefficient of variation (CV)0.239 0.281
Min–max range of strain means0.0495   –   0.117   n/µL 0.0452   –   0.100   n/µL
Mean sample size per strain15.7   mice 15.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0281 0.0281 13.8998 0.0002
strain 8 0.0634 0.0079 3.914 0.0002
sex:strain 8 0.0311 0.0039 1.9179 0.0572
Residuals 286 0.5788 0.002


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 0.0819 0.0529   16 0.0132 0.647 0.02, 0.22 -0.19
B6D2F1/J m 0.06 0.0383   10 0.0121 0.638 0.02, 0.13 -0.33
BALB/cByJ f 0.0905 0.0383   21 0.00835 0.423 0.05, 0.19 0.23
BALB/cByJ m 0.0827 0.0407   22 0.00868 0.492 0.03, 0.2 0.88
C3H/HeJ f 0.075 0.0207   10 0.00654 0.276 0.05, 0.12 -0.53
C3H/HeJ m 0.1 0.0371   11 0.0112 0.371 0.07, 0.19 1.81
C57BL/6J f 0.0769 0.0458   35 0.00774 0.596 0.02, 0.22 -0.44
C57BL/6J m 0.0497 0.0282   30 0.00515 0.568 0.01, 0.12 -0.89
CBA/J f 0.0495 0.0173   22 0.00369 0.349 0.03, 0.09 -1.77
CBA/J m 0.0452 0.0195   23 0.00407 0.431 0.01, 0.09 -1.13
DBA/2J f 0.114 0.0347   11 0.0105 0.306 0.07, 0.17 1.37
DBA/2J m 0.0791 0.023   11 0.00694 0.291 0.05, 0.12 0.69
FVB/NJ f 0.079 0.0515   10 0.0163 0.652 0.03, 0.21 -0.33
FVB/NJ m 0.0745 0.0688   11 0.0207 0.922 0.02, 0.27 0.44
NOD.CB17-Prkdcscid/J f 0.117 0.0481   10 0.0152 0.411 0.07, 0.21 1.52
NOD.CB17-Prkdcscid/J m 0.052 0.0294   10 0.00929 0.565 0.03, 0.11 -0.76
NOD/ShiLtJ f 0.089 0.1   20 0.0224 1.12 0.04, 0.49 0.15
NOD/ShiLtJ m 0.0529 0.0358   21 0.00781 0.677 0.02, 0.17 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 0.0819 0.0112 0.104 0.0597
B6D2F1/J m 0.06 0.0142 0.088 0.032
BALB/cByJ f 0.0905 0.0098 0.1098 0.0712
BALB/cByJ m 0.0827 0.0096 0.1016 0.0638
C3H/HeJ f 0.075 0.0142 0.103 0.047
C3H/HeJ m 0.1 0.0136 0.1267 0.0733
C57BL/6J f 0.0769 0.0076 0.0918 0.0619
C57BL/6J m 0.0497 0.0082 0.0658 0.0335
CBA/J f 0.0495 0.0096 0.0684 0.0307
CBA/J m 0.0452 0.0094 0.0637 0.0268
DBA/2J f 0.1136 0.0136 0.1403 0.0869
DBA/2J m 0.0791 0.0136 0.1058 0.0524
FVB/NJ f 0.079 0.0142 0.107 0.051
FVB/NJ m 0.0745 0.0136 0.1012 0.0478
NOD.CB17-Prkdcscid/J f 0.117 0.0142 0.145 0.089
NOD.CB17-Prkdcscid/J m 0.052 0.0142 0.08 0.024
NOD/ShiLtJ f 0.089 0.0101 0.1088 0.0692
NOD/ShiLtJ m 0.0529 0.0098 0.0722 0.0335


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 0.0709 0.0091 0.0888 0.0531
BALB/cByJ both 0.0866 0.0069 0.1001 0.0731
C3H/HeJ both 0.0875 0.0098 0.1068 0.0682
C57BL/6J both 0.0633 0.0056 0.0743 0.0522
CBA/J both 0.0474 0.0067 0.0606 0.0342
DBA/2J both 0.0964 0.0096 0.1152 0.0775
FVB/NJ both 0.0768 0.0098 0.0961 0.0574
NOD.CB17-Prkdcscid/J both 0.0845 0.0101 0.1043 0.0647
NOD/ShiLtJ both 0.0709 0.007 0.0848 0.0571




  GWAS USING LINEAR MIXED MODELS