Project measure / variable:   Jaxpheno4   MONO16

ID, description, units MPD:22915   MONO16   monocyte count (MONO; units per volume x 103)   [n/µL]  at age 16wks  
Data set, strains Jaxpheno4   inbred   9 strains     sex: both     age: 16wks
Procedure complete blood count
Ontology mappings

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  STRAIN COMPARISON PLOT
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Jaxpheno4 - monocyte count (MONO; units per volume x 103) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.0464   n/µL 0.0531   n/µL
Median of the strain means0.0438   n/µL 0.0536   n/µL
SD of the strain means± 0.0216 ± 0.0178
Coefficient of variation (CV)0.466 0.335
Min–max range of strain means0.0200   –   0.0955   n/µL 0.0280   –   0.0870   n/µL
Mean sample size per strain15.7   mice 15.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0045 0.0045 5.0955 0.0247
strain 8 0.0521 0.0065 7.3243 < 0.0001
sex:strain 8 0.0265 0.0033 3.7224 0.0004
Residuals 286 0.2542 0.0009


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 0.0438 0.0358   16 0.00894 0.817 0.02, 0.13 -0.12
B6D2F1/J m 0.087 0.0512   10 0.0162 0.589 0.02, 0.17 1.9
BALB/cByJ f 0.0433 0.0211   21 0.00459 0.486 0.02, 0.1 -0.14
BALB/cByJ m 0.0355 0.0153   22 0.00327 0.433 0.01, 0.07 -0.99
C3H/HeJ f 0.056 0.0117   10 0.00371 0.21 0.04, 0.07 0.45
C3H/HeJ m 0.0536 0.0206   11 0.00622 0.385 0.03, 0.09 0.03
C57BL/6J f 0.0266 0.0128   35 0.00217 0.482 -0.92
C57BL/6J m 0.056 0.0408   30 0.00745 0.729 0.01, 0.19 0.16
CBA/J f 0.0495 0.0206   22 0.00439 0.415 0.01, 0.09 0.15
CBA/J m 0.0457 0.0273   23 0.00569 0.597 0.01, 0.11 -0.42
DBA/2J f 0.0955 0.0314   11 0.00947 0.329 0.05, 0.14 2.28
DBA/2J m 0.0718 0.0183   11 0.00553 0.255 0.04, 0.1 1.05
FVB/NJ f 0.036 0.0135   10 0.00427 0.375 0.02, 0.06 -0.48
FVB/NJ m 0.0536 0.0605   11 0.0183 1.13 0.01, 0.23 0.03
NOD.CB17-Prkdcscid/J f 0.02 0.0105   10 0.00333 0.527 0.01, 0.04 -1.22
NOD.CB17-Prkdcscid/J m 0.028 0.0181   10 0.00573 0.648 0.01, 0.07 -1.41
NOD/ShiLtJ f 0.0465 0.0376   20 0.00841 0.809 0.02, 0.15 0.01
NOD/ShiLtJ m 0.0471 0.0391   21 0.00854 0.83 0.02, 0.2 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 0.0438 0.0075 0.0584 0.0291
B6D2F1/J m 0.087 0.0094 0.1056 0.0684
BALB/cByJ f 0.0433 0.0065 0.0561 0.0305
BALB/cByJ m 0.0355 0.0064 0.048 0.0229
C3H/HeJ f 0.056 0.0094 0.0746 0.0374
C3H/HeJ m 0.0536 0.009 0.0713 0.0359
C57BL/6J f 0.0266 0.005 0.0365 0.0167
C57BL/6J m 0.056 0.0054 0.0667 0.0453
CBA/J f 0.0495 0.0064 0.0621 0.037
CBA/J m 0.0457 0.0062 0.0579 0.0334
DBA/2J f 0.0955 0.009 0.1131 0.0778
DBA/2J m 0.0718 0.009 0.0895 0.0541
FVB/NJ f 0.036 0.0094 0.0546 0.0174
FVB/NJ m 0.0536 0.009 0.0713 0.0359
NOD.CB17-Prkdcscid/J f 0.02 0.0094 0.0386 0.0014
NOD.CB17-Prkdcscid/J m 0.028 0.0094 0.0466 0.0094
NOD/ShiLtJ f 0.0465 0.0067 0.0596 0.0334
NOD/ShiLtJ m 0.0471 0.0065 0.0599 0.0343


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 0.0654 0.006 0.0772 0.0535
BALB/cByJ both 0.0394 0.0045 0.0483 0.0304
C3H/HeJ both 0.0548 0.0065 0.0676 0.042
C57BL/6J both 0.0413 0.0037 0.0486 0.034
CBA/J both 0.0476 0.0044 0.0563 0.0388
DBA/2J both 0.0836 0.0064 0.0961 0.0711
FVB/NJ both 0.0448 0.0065 0.0576 0.032
NOD.CB17-Prkdcscid/J both 0.024 0.0067 0.0371 0.0109
NOD/ShiLtJ both 0.0468 0.0047 0.056 0.0377




  GWAS USING LINEAR MIXED MODELS