Project measure / variable:   Jaxpheno4   RBC16

ID, description, units MPD:22904   RBC16   red blood cell count (RBC; per volume x 106)   [n/µL]  at age 16wks  
Data set, strains Jaxpheno4   inbred   9 strains     sex: both     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - red blood cell count (RBC; per volume x 106) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means10.2   n/µL 10.4   n/µL
Median of the strain means9.86   n/µL 10.3   n/µL
SD of the strain means± 0.719 ± 0.772
Coefficient of variation (CV)0.0704 0.0741
Min–max range of strain means9.18   –   11.3   n/µL 9.56   –   11.6   n/µL
Mean sample size per strain15.7   mice 15.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.7838 0.7838 4.2402 0.0404
strain 8 104.6702 13.0838 70.7834 < 0.0001
sex:strain 8 5.8761 0.7345 3.9737 0.0002
Residuals 286 52.865 0.1848


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 11.0 0.544   16 0.136 0.0496 10.2, 11.7 1.09
B6D2F1/J m 11.6 0.36   10 0.114 0.0311 10.7, 12.0 1.52
BALB/cByJ f 10.4 0.34   21 0.0742 0.0328 9.61, 11.0 0.26
BALB/cByJ m 10.7 0.218   22 0.0465 0.0204 10.1, 11.0 0.36
C3H/HeJ f 9.18 0.219   10 0.0693 0.0239 8.77, 9.51 -1.44
C3H/HeJ m 9.56 0.31   11 0.0934 0.0324 9.06, 10.0 -1.12
C57BL/6J f 10.9 0.292   35 0.0494 0.0268 10.2, 11.4 0.95
C57BL/6J m 10.6 0.667   30 0.122 0.0628 8.32, 11.6 0.23
CBA/J f 9.82 0.343   22 0.0732 0.035 9.09, 10.5 -0.55
CBA/J m 9.98 0.333   23 0.0694 0.0333 9.09, 10.6 -0.58
DBA/2J f 11.3 0.234   11 0.0704 0.0207 11.0, 11.6 1.51
DBA/2J m 11.6 0.439   11 0.132 0.0379 10.8, 12.4 1.52
FVB/NJ f 9.63 0.527   10 0.167 0.0547 8.24, 10.1 -0.81
FVB/NJ m 9.79 0.312   11 0.0941 0.0319 9.24, 10.4 -0.82
NOD.CB17-Prkdcscid/J f 9.84 0.211   10 0.0666 0.0214 9.53, 10.2 -0.52
NOD.CB17-Prkdcscid/J m 9.69 0.479   10 0.151 0.0494 8.69, 10.2 -0.95
NOD/ShiLtJ f 9.86 0.804   20 0.18 0.0815 7.3, 11.7 -0.49
NOD/ShiLtJ m 10.3 0.243   21 0.0531 0.0237 9.87, 10.9 -0.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 10.9687 0.1075 11.1803 10.7572
B6D2F1/J m 11.56 0.136 11.8276 11.2924
BALB/cByJ f 10.3586 0.0938 10.5432 10.1739
BALB/cByJ m 10.6773 0.0917 10.8577 10.4969
C3H/HeJ f 9.176 0.136 9.4436 8.9084
C3H/HeJ m 9.5582 0.1296 9.8133 9.303
C57BL/6J f 10.8914 0.0727 11.0345 10.7484
C57BL/6J m 10.6187 0.0785 10.7732 10.4642
CBA/J f 9.8218 0.0917 10.0022 9.6414
CBA/J m 9.9848 0.0896 10.1612 9.8083
DBA/2J f 11.2636 0.1296 11.5188 11.0085
DBA/2J m 11.5636 0.1296 11.8188 11.3085
FVB/NJ f 9.627 0.136 9.8946 9.3594
FVB/NJ m 9.7855 0.1296 10.0406 9.5303
NOD.CB17-Prkdcscid/J f 9.841 0.136 10.1086 9.5734
NOD.CB17-Prkdcscid/J m 9.694 0.136 9.9616 9.4264
NOD/ShiLtJ f 9.8625 0.0961 10.0517 9.6733
NOD/ShiLtJ m 10.2643 0.0938 10.4489 10.0796


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 11.2644 0.0867 11.4349 11.0938
BALB/cByJ both 10.5179 0.0656 10.647 10.3888
C3H/HeJ both 9.3671 0.0939 9.552 9.1822
C57BL/6J both 10.755 0.0535 10.8603 10.6498
CBA/J both 9.9033 0.0641 10.0295 9.7771
DBA/2J both 11.4136 0.0917 11.5941 11.2332
FVB/NJ both 9.7062 0.0939 9.8911 9.5214
NOD.CB17-Prkdcscid/J both 9.7675 0.0961 9.9567 9.5783
NOD/ShiLtJ both 10.0634 0.0672 10.1956 9.9312




  GWAS USING LINEAR MIXED MODELS