Project measure / variable:   Jaxpheno4   WBC8

ID, description, units MPD:22901   WBC8   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - white blood cell count (WBC; per volume x 103) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means3.19   n/µL 2.40   n/µL
Median of the strain means3.28   n/µL 2.49   n/µL
SD of the strain means± 1.20 ± 0.798
Coefficient of variation (CV)0.378 0.332
Min–max range of strain means0.405   –   5.39   n/µL 0.629   –   3.50   n/µL
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 84.3726 84.3726 76.0191 < 0.0001
strain 10 299.2567 29.9257 26.9628 < 0.0001
sex:strain 10 23.5483 2.3548 2.1217 0.022
Residuals 386 428.4163 1.1099


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 3.99 0.762   10 0.241 0.191 2.8, 5.21 0.67
B6.129P2-Apoetm1Unc/J m 3.34 0.743   10 0.235 0.222 2.34, 4.53 1.18
B6D2F1/J f 3.0 1.1   10 0.348 0.367 2.02, 5.8 -0.15
B6D2F1/J m 2.12 0.426   12 0.123 0.201 1.35, 2.92 -0.35
BALB/cByJ f 3.71 0.981   21 0.214 0.264 2.43, 6.0 0.44
BALB/cByJ m 2.41 0.403   20 0.0902 0.167 1.76, 2.95 0.01
BALB/cJ f 3.24 0.68   22 0.145 0.21 2.58, 5.61 0.04
BALB/cJ m 2.86 1.68   21 0.367 0.587 0.73, 6.57 0.57
C3H/HeJ f 3.28 0.811   13 0.225 0.248 1.81, 4.55 0.08
C3H/HeJ m 2.49 0.738   11 0.222 0.296 1.79, 3.82 0.11
C57BL/6J f 3.48 1.49   42 0.229 0.427 1.75, 8.67 0.24
C57BL/6J m 2.62 0.916   34 0.157 0.349 1.08, 5.11 0.27
CBA/J f 2.5 0.834   21 0.182 0.333 1.54, 5.13 -0.57
CBA/J m 1.8 0.541   23 0.113 0.301 1.05, 2.81 -0.75
DBA/2J f 5.39 2.03   23 0.423 0.376 2.52, 10.2 1.83
DBA/2J m 3.5 1.16   20 0.258 0.33 2.04, 7.44 1.38
FVB/NJ f 3.44 1.12   11 0.337 0.325 2.38, 6.02 0.21
FVB/NJ m 2.78 0.727   14 0.194 0.262 1.68, 3.99 0.47
NOD.CB17-Prkdcscid/J f 0.405 0.128   11 0.0386 0.316 0.24, 0.7 -2.31
NOD.CB17-Prkdcscid/J m 0.629 0.104   12 0.03 0.165 0.47, 0.74 -2.22
NOD/ShiLtJ f 2.61 0.94   21 0.205 0.361 1.53, 4.71 -0.48
NOD/ShiLtJ m 1.87 0.687   26 0.135 0.367 0.75, 3.16 -0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 3.986 0.3331 4.641 3.331
B6.129P2-Apoetm1Unc/J m 3.343 0.3331 3.998 2.688
B6D2F1/J f 2.998 0.3331 3.653 2.343
B6D2F1/J m 2.1233 0.3041 2.7213 1.5254
BALB/cByJ f 3.7143 0.2299 4.1663 3.2623
BALB/cByJ m 2.414 0.2356 2.8772 1.9508
BALB/cJ f 3.2423 0.2246 3.6839 2.8007
BALB/cJ m 2.8605 0.2299 3.3125 2.4085
C3H/HeJ f 3.2769 0.2922 3.8514 2.7024
C3H/HeJ m 2.4945 0.3176 3.1191 1.87
C57BL/6J f 3.4812 0.1626 3.8008 3.1616
C57BL/6J m 2.6244 0.1807 2.9796 2.2692
CBA/J f 2.5014 0.2299 2.9534 2.0494
CBA/J m 1.7987 0.2197 2.2306 1.3668
DBA/2J f 5.3948 0.2197 5.8267 4.9629
DBA/2J m 3.501 0.2356 3.9642 3.0378
FVB/NJ f 3.4373 0.3176 4.0618 2.8127
FVB/NJ m 2.7771 0.2816 3.3307 2.2236
NOD.CB17-Prkdcscid/J f 0.4055 0.3176 1.03 0.0
NOD.CB17-Prkdcscid/J m 0.6292 0.3041 1.2271 0.0312
NOD/ShiLtJ f 2.6086 0.2299 3.0606 2.1566
NOD/ShiLtJ m 1.8696 0.2066 2.2758 1.4634


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 3.6645 0.2356 4.1277 3.2013
B6D2F1/J both 2.5607 0.2255 3.0041 2.1172
BALB/cByJ both 3.0641 0.1646 3.3877 2.7406
BALB/cJ both 3.0514 0.1607 3.3673 2.7354
C3H/HeJ both 2.8857 0.2158 3.31 2.4614
C57BL/6J both 3.0528 0.1215 3.2917 2.8139
CBA/J both 2.1501 0.159 2.4627 1.8375
DBA/2J both 4.4479 0.1611 4.7645 4.1312
FVB/NJ both 3.1072 0.2122 3.5245 2.6899
NOD.CB17-Prkdcscid/J both 0.5173 0.2199 0.9496 0.085
NOD/ShiLtJ both 2.2391 0.1545 2.543 1.9352




  GWAS USING LINEAR MIXED MODELS