Project measure / variable:   Jaxpheno3   P8

ID, description, units MPD:22858   P8   phosphorus (plasma phosphate)   [mg/dL]  at age 8wks  
Data set, strains Jaxpheno3   inbred   11 strains     sex: both     age: 8wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Jaxpheno3 - phosphorus (plasma phosphate) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means10.3   mg/dL 10.4   mg/dL
Median of the strain means9.68   mg/dL 10.2   mg/dL
SD of the strain means± 1.20 ± 1.41
Coefficient of variation (CV)0.116 0.135
Min–max range of strain means9.26   –   13.1   mg/dL 8.75   –   13.9   mg/dL
Mean sample size per strain15.8   mice 17.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1249 0.1249 0.0522 0.8193
strain 10 302.4299 30.243 12.648 < 0.0001
sex:strain 10 91.3985 9.1398 3.8224 0.0001
Residuals 378 903.8467 2.3911


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 11.5 1.13   10 0.359 0.0985 9.6, 13.3 1.0
B6.129P2-Apoetm1Unc/J m 9.53 0.849   10 0.268 0.089 8.5, 10.5 -0.64
B6D2F1/J f 13.1 1.56   10 0.495 0.12 10.2, 14.9 2.34
B6D2F1/J m 13.9 1.38   10 0.436 0.0992 12.1, 16.9 2.46
BALB/cByJ f 9.51 0.877   20 0.196 0.0922 7.9, 10.8 -0.66
BALB/cByJ m 9.73 1.24   20 0.277 0.127 7.9, 11.7 -0.49
BALB/cJ f 9.46 0.989   20 0.221 0.104 7.2, 11.2 -0.7
BALB/cJ m 8.99 1.34   22 0.285 0.149 7.1, 11.9 -1.02
C3H/HeJ f 9.68 0.777   10 0.246 0.0803 8.4, 11.1 -0.52
C3H/HeJ m 8.75 1.08   10 0.341 0.123 7.7, 10.5 -1.19
C57BL/6J f 10.3 1.91   30 0.349 0.185 7.1, 14.0 0.0
C57BL/6J m 10.3 2.29   54 0.312 0.222 6.1, 15.2 -0.09
CBA/J f 10.8 1.33   21 0.29 0.123 8.4, 13.0 0.42
CBA/J m 10.2 1.84   30 0.336 0.18 7.3, 13.9 -0.16
DBA/2J f 10.9 1.31   21 0.286 0.121 8.2, 13.6 0.5
DBA/2J m 10.2 1.95   20 0.437 0.191 6.7, 14.1 -0.16
FVB/NJ f 9.3 0.921   10 0.291 0.0991 8.3, 11.4 -0.84
FVB/NJ m 11.4 2.05   12 0.593 0.18 8.0, 14.4 0.69
NOD.CB17-Prkdcscid/J f 9.26 0.628   10 0.198 0.0678 8.1, 10.3 -0.87
NOD.CB17-Prkdcscid/J m 11.2 1.42   10 0.45 0.127 9.7, 14.3 0.55
NOD/ShiLtJ f 9.52 0.894   20 0.2 0.0939 7.6, 11.5 -0.65
NOD/ShiLtJ m 10.5 0.916   20 0.205 0.0872 8.9, 11.9 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 11.51 0.489 12.4715 10.5485
B6.129P2-Apoetm1Unc/J m 9.53 0.489 10.4915 8.5685
B6D2F1/J f 13.07 0.489 14.0315 12.1085
B6D2F1/J m 13.89 0.489 14.8515 12.9285
BALB/cByJ f 9.515 0.3458 10.1949 8.8351
BALB/cByJ m 9.73 0.3458 10.4099 9.0501
BALB/cJ f 9.46 0.3458 10.1399 8.7801
BALB/cJ m 8.9864 0.3297 9.6346 8.3381
C3H/HeJ f 9.68 0.489 10.6415 8.7185
C3H/HeJ m 8.75 0.489 9.7115 7.7885
C57BL/6J f 10.3267 0.2823 10.8818 9.7716
C57BL/6J m 10.2926 0.2104 10.7063 9.8788
CBA/J f 10.8429 0.3374 11.5063 10.1794
CBA/J m 10.23 0.2823 10.7851 9.6749
DBA/2J f 10.8667 0.3374 11.5302 10.2032
DBA/2J m 10.23 0.3458 10.9099 9.5501
FVB/NJ f 9.3 0.489 10.2615 8.3385
FVB/NJ m 11.4 0.4464 12.2777 10.5223
NOD.CB17-Prkdcscid/J f 9.26 0.489 10.2215 8.2985
NOD.CB17-Prkdcscid/J m 11.2 0.489 12.1615 10.2385
NOD/ShiLtJ f 9.52 0.3458 10.1999 8.8401
NOD/ShiLtJ m 10.505 0.3458 11.1849 9.8251


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 10.52 0.3458 11.1999 9.8401
B6D2F1/J both 13.48 0.3458 14.1599 12.8001
BALB/cByJ both 9.6225 0.2445 10.1032 9.1418
BALB/cJ both 9.2232 0.2389 9.6929 8.7535
C3H/HeJ both 9.215 0.3458 9.8949 8.5351
C57BL/6J both 10.3096 0.1761 10.6558 9.9635
CBA/J both 10.5364 0.22 10.969 10.1039
DBA/2J both 10.5483 0.2416 11.0233 10.0733
FVB/NJ both 10.35 0.331 11.0009 9.6991
NOD.CB17-Prkdcscid/J both 10.23 0.3458 10.9099 9.5501
NOD/ShiLtJ both 10.0125 0.2445 10.4932 9.5318




  GWAS USING LINEAR MIXED MODELS