Project measure / variable:   Jaxpheno3   TG8

ID, description, units MPD:22840   TG8   triglycerides (plasma, 4h fast)   [mg/dL]  at age 8wks  
Data set, strains Jaxpheno3   inbred   11 strains     sex: both     age: 8wks
Procedure lipid profile
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  STRAIN COMPARISON PLOT
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Jaxpheno3 - triglycerides (plasma, 4h fast) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means134   mg/dL 155   mg/dL
Median of the strain means122   mg/dL 175   mg/dL
SD of the strain means± 64.0 ± 71.2
Coefficient of variation (CV)0.479 0.459
Min–max range of strain means57.4   –   254   mg/dL 79.5   –   301   mg/dL
Mean sample size per strain15.8   mice 17.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17081.0232 17081.0232 10.64 0.0012
strain 10 1217027.9588 121702.7959 75.8105 < 0.0001
sex:strain 10 202890.6784 20289.0678 12.6384 < 0.0001
Residuals 378 606824.1796 1605.355


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 254.0 57.8   10 18.3 0.228 187.0, 367.0 1.88
B6.129P2-Apoetm1Unc/J m 301.0 83.0   10 26.2 0.276 164.0, 422.0 2.05
B6D2F1/J f 84.6 16.7   10 5.28 0.197 52.0, 104.0 -0.77
B6D2F1/J m 108.0 15.6   10 4.93 0.145 87.0, 144.0 -0.66
BALB/cByJ f 122.0 24.6   20 5.5 0.201 94.0, 184.0 -0.18
BALB/cByJ m 182.0 26.7   20 5.97 0.147 138.0, 234.0 0.38
BALB/cJ f 99.5 18.5   20 4.15 0.186 63.0, 141.0 -0.53
BALB/cJ m 92.3 33.7   22 7.18 0.365 54.0, 188.0 -0.88
C3H/HeJ f 77.5 15.1   10 4.78 0.195 65.0, 116.0 -0.88
C3H/HeJ m 94.6 15.1   10 4.78 0.16 72.0, 115.0 -0.85
C57BL/6J f 92.9 22.2   30 4.05 0.239 52.0, 137.0 -0.64
C57BL/6J m 79.5 18.1   54 2.46 0.227 40.0, 121.0 -1.06
CBA/J f 157.0 66.8   21 14.6 0.426 98.0, 384.0 0.37
CBA/J m 231.0 80.2   30 14.6 0.347 110.0, 380.0 1.06
DBA/2J f 160.0 40.2   21 8.77 0.251 73.0, 250.0 0.41
DBA/2J m 178.0 32.9   20 7.35 0.185 138.0, 233.0 0.32
FVB/NJ f 238.0 45.0   10 14.2 0.189 183.0, 311.0 1.63
FVB/NJ m 186.0 43.2   12 12.5 0.232 122.0, 280.0 0.43
NOD.CB17-Prkdcscid/J f 57.4 12.9   10 4.08 0.225 39.0, 74.0 -1.19
NOD.CB17-Prkdcscid/J m 175.0 55.4   10 17.5 0.317 74.0, 283.0 0.28
NOD/ShiLtJ f 127.0 21.9   20 4.91 0.172 98.0, 184.0 -0.1
NOD/ShiLtJ m 80.8 26.6   20 5.94 0.329 49.0, 147.0 -1.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 253.7 12.6703 278.613 228.787
B6.129P2-Apoetm1Unc/J m 300.8 12.6703 325.713 275.887
B6D2F1/J f 84.6 12.6703 109.513 59.687
B6D2F1/J m 107.6 12.6703 132.513 82.687
BALB/cByJ f 122.5 8.9592 140.1162 104.8838
BALB/cByJ m 181.6 8.9592 199.2162 163.9838
BALB/cJ f 99.45 8.9592 117.0662 81.8338
BALB/cJ m 92.3182 8.5423 109.1145 75.5218
C3H/HeJ f 77.5 12.6703 102.413 52.587
C3H/HeJ m 94.6 12.6703 119.513 69.687
C57BL/6J f 92.9333 7.3152 107.3169 78.5498
C57BL/6J m 79.537 5.4524 90.2579 68.8162
CBA/J f 156.8571 8.7433 174.0488 139.6655
CBA/J m 230.7667 7.3152 245.1502 216.3831
DBA/2J f 160.2381 8.7433 177.4297 143.0465
DBA/2J m 177.75 8.9592 195.3662 160.1338
FVB/NJ f 238.1 12.6703 263.013 213.187
FVB/NJ m 186.1667 11.5663 208.909 163.4243
NOD.CB17-Prkdcscid/J f 57.4 12.6703 82.313 32.487
NOD.CB17-Prkdcscid/J m 174.7 12.6703 199.613 149.787
NOD/ShiLtJ f 127.3 8.9592 144.9162 109.6838
NOD/ShiLtJ m 80.8 8.9592 98.4162 63.1838


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 277.25 8.9592 294.8662 259.6338
B6D2F1/J both 96.1 8.9592 113.7162 78.4838
BALB/cByJ both 152.05 6.3351 164.5065 139.5935
BALB/cJ both 95.8841 6.1895 108.0542 83.714
C3H/HeJ both 86.05 8.9592 103.6662 68.4338
C57BL/6J both 86.2352 4.5618 95.2049 77.2655
CBA/J both 193.8119 5.6999 205.0195 182.6043
DBA/2J both 168.994 6.2593 181.3014 156.6867
FVB/NJ both 212.1333 8.5778 228.9995 195.2671
NOD.CB17-Prkdcscid/J both 116.05 8.9592 133.6662 98.4338
NOD/ShiLtJ both 104.05 6.3351 116.5065 91.5935




  GWAS USING LINEAR MIXED MODELS