Project measure / variable:   Jaxpheno3   BUN8

ID, description, units MPD:22825   BUN8   blood urea nitrogen (BUN)   [mg/dL]  at age 8wks  
Data set, strains Jaxpheno3   inbred   11 strains     sex: both     age: 8wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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Jaxpheno3 - blood urea nitrogen (BUN) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means21.5   mg/dL 23.5   mg/dL
Median of the strain means20.6   mg/dL 24.1   mg/dL
SD of the strain means± 3.01 ± 2.55
Coefficient of variation (CV)0.140 0.109
Min–max range of strain means17.0   –   27.1   mg/dL 20.0   –   27.4   mg/dL
Mean sample size per strain15.8   mice 17.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 180.0684 180.0684 23.5215 < 0.0001
strain 10 2142.5457 214.2546 27.9871 < 0.0001
sex:strain 10 704.7164 70.4716 9.2054 < 0.0001
Residuals 378 2893.767 7.6555


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 25.2 2.62   10 0.827 0.104 21.0, 29.0 1.22
B6.129P2-Apoetm1Unc/J m 27.4 3.95   10 1.25 0.144 20.0, 32.0 1.54
B6D2F1/J f 20.6 2.22   10 0.702 0.108 17.0, 24.0 -0.31
B6D2F1/J m 23.1 2.85   10 0.9 0.123 17.0, 26.0 -0.14
BALB/cByJ f 20.6 1.87   20 0.418 0.0906 17.0, 24.0 -0.31
BALB/cByJ m 25.3 4.17   20 0.932 0.165 19.0, 35.0 0.72
BALB/cJ f 17.0 1.72   20 0.384 0.101 14.0, 20.0 -1.51
BALB/cJ m 20.0 3.15   22 0.673 0.157 17.0, 30.0 -1.36
C3H/HeJ f 19.7 1.83   10 0.578 0.0928 17.0, 23.0 -0.61
C3H/HeJ m 20.8 1.81   10 0.573 0.0872 19.0, 23.0 -1.04
C57BL/6J f 27.1 4.0   30 0.731 0.148 19.0, 38.0 1.85
C57BL/6J m 24.2 3.11   54 0.424 0.129 19.0, 32.0 0.29
CBA/J f 20.2 3.5   21 0.764 0.173 15.0, 25.0 -0.44
CBA/J m 20.0 1.51   30 0.275 0.0754 17.0, 24.0 -1.36
DBA/2J f 21.8 2.36   21 0.516 0.109 18.0, 25.0 0.09
DBA/2J m 21.8 1.58   20 0.352 0.0723 19.0, 25.0 -0.65
FVB/NJ f 18.3 1.42   10 0.448 0.0775 16.0, 20.0 -1.08
FVB/NJ m 24.9 3.45   12 0.996 0.138 22.0, 31.0 0.56
NOD.CB17-Prkdcscid/J f 24.3 2.06   10 0.651 0.0847 22.0, 28.0 0.92
NOD.CB17-Prkdcscid/J m 26.5 1.51   10 0.477 0.057 24.0, 29.0 1.19
NOD/ShiLtJ f 22.1 2.47   20 0.552 0.112 19.0, 30.0 0.19
NOD/ShiLtJ m 24.1 2.06   20 0.46 0.0853 20.0, 28.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 25.2 0.875 26.9204 23.4796
B6.129P2-Apoetm1Unc/J m 27.4 0.875 29.1204 25.6796
B6D2F1/J f 20.6 0.875 22.3204 18.8796
B6D2F1/J m 23.1 0.875 24.8204 21.3796
BALB/cByJ f 20.65 0.6187 21.8665 19.4335
BALB/cByJ m 25.3 0.6187 26.5165 24.0835
BALB/cJ f 17.0 0.6187 18.2165 15.7835
BALB/cJ m 20.0455 0.5899 21.2053 18.8856
C3H/HeJ f 19.7 0.875 21.4204 17.9796
C3H/HeJ m 20.8 0.875 22.5204 19.0796
C57BL/6J f 27.1 0.5052 28.0933 26.1067
C57BL/6J m 24.1852 0.3765 24.9255 23.4448
CBA/J f 20.1905 0.6038 21.3777 19.0033
CBA/J m 20.0 0.5052 20.9933 19.0067
DBA/2J f 21.7619 0.6038 22.9491 20.5747
DBA/2J m 21.8 0.6187 23.0165 20.5835
FVB/NJ f 18.3 0.875 20.0204 16.5796
FVB/NJ m 24.9167 0.7987 26.4872 23.3462
NOD.CB17-Prkdcscid/J f 24.3 0.875 26.0204 22.5796
NOD.CB17-Prkdcscid/J m 26.5 0.875 28.2204 24.7796
NOD/ShiLtJ f 22.1 0.6187 23.3165 20.8835
NOD/ShiLtJ m 24.15 0.6187 25.3665 22.9335


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 26.3 0.6187 27.5165 25.0835
B6D2F1/J both 21.85 0.6187 23.0665 20.6335
BALB/cByJ both 22.975 0.4375 23.8352 22.1148
BALB/cJ both 18.5227 0.4274 19.3631 17.6823
C3H/HeJ both 20.25 0.6187 21.4665 19.0335
C57BL/6J both 25.6426 0.315 26.262 25.0232
CBA/J both 20.0952 0.3936 20.8692 19.3213
DBA/2J both 21.781 0.4322 22.6308 20.9311
FVB/NJ both 21.6083 0.5923 22.773 20.4436
NOD.CB17-Prkdcscid/J both 25.4 0.6187 26.6165 24.1835
NOD/ShiLtJ both 23.125 0.4375 23.9852 22.2648




  GWAS USING LINEAR MIXED MODELS