Project measure / variable:   Jaxpheno3   GLU16

ID, description, units MPD:22802   GLU16   glucose (plasma GLU, 4h fast)   [mg/dL]  at age 16wks  
Data set, strains Jaxpheno3   inbred   8 strains     sex: both     age: 16wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Jaxpheno3 - glucose (plasma GLU, 4h fast) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means189   mg/dL 153   mg/dL
Median of the strain means147   mg/dL 156   mg/dL
SD of the strain means± 143 ± 38.0
Coefficient of variation (CV)0.760 0.249
Min–max range of strain means115   –   541   mg/dL 97.0   –   223   mg/dL
Mean sample size per strain16.2   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 389661.6308 389661.6308 23.5993 < 0.0001
strain 7 2234867.511 319266.7873 19.336 < 0.0001
sex:strain 7 1713228.2636 244746.8948 14.8228 < 0.0001
Residuals 245 4045329.8667 16511.5505


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 142.0 17.8   10 5.63 0.125 124.0, 181.0 -0.33
B6D2F1/J m 164.0 14.7   10 4.65 0.0895 137.0, 180.0 0.29
BALB/cByJ f 115.0 15.8   20 3.53 0.138 86.0, 144.0 -0.51
BALB/cByJ m 97.0 17.3   20 3.86 0.178 69.0, 138.0 -1.47
C3H/HeJ f 162.0 16.4   10 5.19 0.101 139.0, 199.0 -0.19
C3H/HeJ m 169.0 13.6   10 4.31 0.0807 149.0, 194.0 0.42
C57BL/6J f 152.0 29.2   30 5.34 0.193 105.0, 205.0 -0.26
C57BL/6J m 159.0 25.1   30 4.58 0.158 117.0, 223.0 0.16
CBA/J f 152.0 16.8   10 5.31 0.11 128.0, 187.0 -0.26
CBA/J m 223.0 41.3   20 9.24 0.185 151.0, 301.0 1.84
DBA/2J f 124.0 15.4   10 4.86 0.124 92.0, 145.0 -0.45
DBA/2J m 154.0 10.0   10 3.17 0.0651 140.0, 168.0 0.03
NOD.CB17-Prkdcscid/J f 121.0 20.1   10 6.37 0.166 96.0, 164.0 -0.47
NOD.CB17-Prkdcscid/J m 113.0 11.3   10 3.59 0.1 91.0, 130.0 -1.05
NOD/ShiLtJ f 541.0 360.0   30 65.7 0.665 84.0, 1088.0 2.46
NOD/ShiLtJ m 144.0 97.1   21 21.2 0.676 85.0, 551.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 142.3 40.6344 222.3373 62.2627
B6D2F1/J m 164.3 40.6344 244.3373 84.2627
BALB/cByJ f 114.65 28.7329 171.2449 58.0551
BALB/cByJ m 96.95 28.7329 153.5449 40.3551
C3H/HeJ f 162.3 40.6344 242.3373 82.2627
C3H/HeJ m 168.8 40.6344 248.8373 88.7627
C57BL/6J f 151.6667 23.4603 197.8762 105.4571
C57BL/6J m 159.1667 23.4603 205.3762 112.9571
CBA/J f 151.9 40.6344 231.9373 71.8627
CBA/J m 223.0 28.7329 279.5949 166.4051
DBA/2J f 124.0 40.6344 204.0373 43.9627
DBA/2J m 153.9 40.6344 233.9373 73.8627
NOD.CB17-Prkdcscid/J f 121.1 40.6344 201.1373 41.0627
NOD.CB17-Prkdcscid/J m 113.4 40.6344 193.4373 33.3627
NOD/ShiLtJ f 540.9333 23.4603 587.1429 494.7238
NOD/ShiLtJ m 143.6667 28.0404 198.8977 88.4357


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 153.3 28.7329 209.8949 96.7051
BALB/cByJ both 105.8 20.3172 145.8187 65.7813
C3H/HeJ both 165.55 28.7329 222.1449 108.9551
C57BL/6J both 155.4167 16.5889 188.0918 122.7416
CBA/J both 187.45 24.8834 236.4627 138.4373
DBA/2J both 138.95 28.7329 195.5449 82.3551
NOD.CB17-Prkdcscid/J both 117.25 28.7329 173.8449 60.6551
NOD/ShiLtJ both 342.3 18.2801 378.3062 306.2938




  GWAS USING LINEAR MIXED MODELS