Project measure / variable:   Brown2   rev_err_d1

ID, description, units MPD:22513   rev_err_d1   reversal training mean errors   [n]  day1  
Data set, strains Brown2   inbred   13 strains     sex: both     age: 10-18wks
Procedure Barnes circular maze
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  STRAIN COMPARISON PLOT
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Brown2 - reversal training mean errors day1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means9.81   n 10.3   n
Median of the strain means8.78   n 9.91   n
SD of the strain means± 4.01 ± 2.97
Coefficient of variation (CV)0.409 0.288
Min–max range of strain means5.16   –   17.1   n 5.82   –   17.4   n
Mean sample size per strain11.6   mice 11.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 59.9787 59.9787 1.1335 0.2879
strain 12 2763.5458 230.2955 4.352 < 0.0001
sex:strain 12 764.0049 63.6671 1.2032 0.2802
Residuals 283 14975.4875 52.9169


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.91 5.79   12 1.67 0.838 1.75, 21.2 -0.72
129S1/SvImJ m 10.5 6.83   12 1.97 0.648 1.25, 28.0 0.07
A/J f 7.21 4.57   12 1.32 0.633 0.75, 13.8 -0.65
A/J m 10.2 5.88   18 1.39 0.578 3.25, 22.5 -0.03
AKR/J f 13.1 9.02   12 2.6 0.686 2.0, 24.8 0.82
AKR/J m 14.5 12.9   12 3.72 0.89 5.5, 52.2 1.42
BALB/cByJ f 6.0 3.27   21 0.713 0.544 1.5, 13.5 -0.95
BALB/cByJ m 9.45 6.51   12 1.88 0.689 2.25, 25.0 -0.28
BALB/cJ f 5.45 2.91   14 0.778 0.535 2.5, 13.5 -1.09
BALB/cJ m 9.91 8.18   10 2.59 0.826 1.25, 28.8 -0.13
C3H/HeJ f 15.5 9.26   10 2.93 0.598 0.75, 35.5 1.42
C3H/HeJ m 9.39 4.03   10 1.27 0.429 4.25, 13.0 -0.3
C57BL/6J f 5.16 1.64   11 0.493 0.317 3.25, 8.75 -1.16
C57BL/6J m 5.82 2.65   12 0.764 0.455 3.25, 12.8 -1.51
CAST/EiJ f 8.57 5.34   4 2.67 0.622 3.75, 15.8 -0.31
CAST/EiJ m 9.9 5.61   12 1.62 0.566 3.75, 22.8 -0.13
DBA/2J f 9.45 6.35   12 1.83 0.672 2.0, 25.0 -0.09
DBA/2J m 10.1 12.6   11 3.81 1.25 3.0, 45.8 -0.06
FVB/NJ f 17.1 14.2   11 4.29 0.831 7.5, 53.8 1.82
FVB/NJ m 17.4 8.45   12 2.44 0.485 7.0, 30.0 2.4
MOLF/EiJ f 8.78 6.27   12 1.81 0.714 3.25, 20.8 -0.26
MOLF/EiJ m 6.91 2.48   11 0.748 0.359 3.0, 11.5 -1.14
SJL/J f 9.64 6.88   12 1.99 0.714 2.25, 26.5 -0.04
SJL/J m 11.2 6.71   12 1.94 0.6 3.25, 25.8 0.31
SM/J f 14.7 10.0   10 3.17 0.682 3.0, 31.2 1.22
SM/J m 8.52 6.37   12 1.84 0.748 1.25, 20.5 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.9125 2.0999 11.046 2.779
129S1/SvImJ m 10.5417 2.0999 14.6751 6.4082
A/J f 7.2125 2.0999 11.346 3.079
A/J m 10.1667 1.7146 13.5416 6.7917
AKR/J f 13.1417 2.0999 17.2751 9.0082
AKR/J m 14.475 2.0999 18.6085 10.3415
BALB/cByJ f 6.0 1.5874 9.1246 2.8754
BALB/cByJ m 9.45 2.0999 13.5835 5.3165
BALB/cJ f 5.4464 1.9442 9.2733 1.6196
BALB/cJ m 9.91 2.3004 14.438 5.382
C3H/HeJ f 15.48 2.3004 20.008 10.952
C3H/HeJ m 9.39 2.3004 13.918 4.862
C57BL/6J f 5.1591 2.1933 9.4764 0.8418
C57BL/6J m 5.8167 2.0999 9.9501 1.6832
CAST/EiJ f 8.575 3.6372 15.7344 1.4156
CAST/EiJ m 9.9 2.0999 14.0335 5.7665
DBA/2J f 9.4458 2.0999 13.5793 5.3124
DBA/2J m 10.1227 2.1933 14.44 5.8054
FVB/NJ f 17.1273 2.1933 21.4446 12.81
FVB/NJ m 17.4125 2.0999 21.546 13.279
MOLF/EiJ f 8.775 2.0999 12.9085 4.6415
MOLF/EiJ m 6.9091 2.1933 11.2264 2.5918
SJL/J f 9.6375 2.0999 13.771 5.504
SJL/J m 11.175 2.0999 15.3085 7.0415
SM/J f 14.705 2.3004 19.233 10.177
SM/J m 8.5208 2.0999 12.6543 4.3874


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8.7271 1.4849 11.6499 5.8043
A/J both 8.6896 1.3555 11.3577 6.0214
AKR/J both 13.8083 1.4849 16.7311 10.8855
BALB/cByJ both 7.725 1.3162 10.3158 5.1342
BALB/cJ both 7.6782 1.5059 10.6425 4.7139
C3H/HeJ both 12.435 1.6266 15.6368 9.2332
C57BL/6J both 5.4879 1.5183 8.4764 2.4994
CAST/EiJ both 9.2375 2.0999 13.371 5.104
DBA/2J both 9.7843 1.5183 12.7728 6.7958
FVB/NJ both 17.2699 1.5183 20.2584 14.2814
MOLF/EiJ both 7.842 1.5183 10.8305 4.8535
SJL/J both 10.4062 1.4849 13.3291 7.4834
SM/J both 11.6129 1.5574 14.6784 8.5474




  GWAS USING LINEAR MIXED MODELS