Project measure / variable:   Brown2   acq_err_d4

ID, description, units MPD:22512   acq_err_d4   acquisition training mean errors   [n]  day4  
Data set, strains Brown2   inbred   13 strains     sex: both     age: 10-18wks
Procedure Barnes circular maze
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  STRAIN COMPARISON PLOT
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Brown2 - acquisition training mean errors day4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means9.42   n 10.3   n
Median of the strain means8.79   n 9.78   n
SD of the strain means± 3.98 ± 3.83
Coefficient of variation (CV)0.423 0.371
Min–max range of strain means4.25   –   18.4   n 3.92   –   18.1   n
Mean sample size per strain11.6   mice 11.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 148.2547 148.2547 3.1411 0.0774
strain 12 3396.3611 283.0301 5.9965 < 0.0001
sex:strain 12 822.8362 68.5697 1.4528 0.1417
Residuals 283 13357.3011 47.1989


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.71 6.07   12 1.75 1.06 0.75, 18.2 -0.93
129S1/SvImJ m 9.78 5.33   12 1.54 0.546 3.5, 19.8 -0.14
A/J f 5.85 4.01   12 1.16 0.685 1.25, 13.5 -0.9
A/J m 10.9 7.9   18 1.86 0.725 1.5, 35.8 0.15
AKR/J f 10.2 7.64   12 2.21 0.746 2.75, 23.0 0.2
AKR/J m 16.0 12.6   12 3.63 0.787 5.75, 50.5 1.48
BALB/cByJ f 5.51 2.98   21 0.65 0.54 2.0, 13.5 -0.98
BALB/cByJ m 8.81 5.03   12 1.45 0.571 2.0, 16.5 -0.39
BALB/cJ f 8.7 5.28   14 1.41 0.607 1.25, 22.5 -0.18
BALB/cJ m 10.8 8.55   10 2.7 0.789 0.75, 26.8 0.13
C3H/HeJ f 13.5 9.19   10 2.91 0.682 5.0, 36.8 1.02
C3H/HeJ m 11.0 3.92   10 1.24 0.355 4.0, 15.5 0.18
C57BL/6J f 4.25 3.57   11 1.08 0.839 1.0, 14.0 -1.3
C57BL/6J m 3.92 1.84   12 0.532 0.471 1.5, 8.0 -1.67
CAST/EiJ f 10.1 2.51   4 1.25 0.249 7.0, 12.2 0.17
CAST/EiJ m 7.88 5.13   12 1.48 0.652 1.0, 20.8 -0.64
DBA/2J f 10.2 6.64   12 1.92 0.653 2.25, 22.2 0.2
DBA/2J m 7.04 6.77   11 2.04 0.961 2.75, 26.2 -0.86
FVB/NJ f 13.7 8.6   11 2.59 0.63 5.75, 29.7 1.08
FVB/NJ m 18.1 11.6   12 3.33 0.64 4.25, 38.8 2.03
MOLF/EiJ f 7.54 6.77   12 1.95 0.897 0.75, 25.0 -0.47
MOLF/EiJ m 7.07 5.08   11 1.53 0.718 3.25, 21.0 -0.85
SJL/J f 8.79 3.22   12 0.93 0.367 3.75, 13.0 -0.16
SJL/J m 9.33 4.67   12 1.35 0.501 1.75, 18.0 -0.26
SM/J f 18.4 11.3   10 3.58 0.615 7.25, 46.0 2.26
SM/J m 13.5 8.28   12 2.39 0.615 2.25, 30.0 0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.7083 1.9832 9.6121 1.8046
129S1/SvImJ m 9.775 1.9832 13.6788 5.8712
A/J f 5.8542 1.9832 9.7579 1.9504
A/J m 10.8917 1.6193 14.0791 7.7042
AKR/J f 10.25 1.9832 14.1538 6.3462
AKR/J m 15.975 1.9832 19.8788 12.0712
BALB/cByJ f 5.5095 1.4992 8.4605 2.5585
BALB/cByJ m 8.8125 1.9832 12.7163 4.9087
BALB/cJ f 8.7036 1.8361 12.3178 5.0894
BALB/cJ m 10.835 2.1725 15.1114 6.5586
C3H/HeJ f 13.48 2.1725 17.7564 9.2036
C3H/HeJ m 11.025 2.1725 15.3014 6.7486
C57BL/6J f 4.25 2.0714 8.3274 0.1726
C57BL/6J m 3.9167 1.9832 7.8204 0.0129
CAST/EiJ f 10.05 3.4351 16.8115 3.2885
CAST/EiJ m 7.875 1.9832 11.7788 3.9712
DBA/2J f 10.1667 1.9832 14.0704 6.2629
DBA/2J m 7.0409 2.0714 11.1183 2.9635
FVB/NJ f 13.6545 2.0714 17.7319 9.5772
FVB/NJ m 18.0625 1.9832 21.9663 14.1587
MOLF/EiJ f 7.5417 1.9832 11.4454 3.6379
MOLF/EiJ m 7.0727 2.0714 11.1501 2.9954
SJL/J f 8.7875 1.9832 12.6913 4.8837
SJL/J m 9.3292 1.9832 13.2329 5.4254
SM/J f 18.41 2.1725 22.6864 14.1336
SM/J m 13.4583 1.9832 17.3621 9.5546


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.7417 1.4024 10.5021 4.9813
A/J both 8.3729 1.2802 10.8928 5.853
AKR/J both 13.1125 1.4024 15.8729 10.3521
BALB/cByJ both 7.161 1.2431 9.6078 4.7142
BALB/cJ both 9.7693 1.4223 12.5688 6.9697
C3H/HeJ both 12.2525 1.5362 15.2764 9.2286
C57BL/6J both 4.0833 1.4339 6.9058 1.2609
CAST/EiJ both 8.9625 1.9832 12.8663 5.0587
DBA/2J both 8.6038 1.4339 11.4262 5.7814
FVB/NJ both 15.8585 1.4339 18.6809 13.0361
MOLF/EiJ both 7.3072 1.4339 10.1296 4.4848
SJL/J both 9.0583 1.4024 11.8187 6.2979
SM/J both 15.9342 1.4708 18.8293 13.039




  GWAS USING LINEAR MIXED MODELS