Phenotype measure:   Brown2   rev_dist_d3


  STRAIN COMPARISON PLOT
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Brown2 - reversal training mean distance traveled to find hidden platform, day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains14 strains
Mean of the strain means656   cm 652   cm
Median of the strain means664   cm 556   cm
SD of the strain means± 307 ± 429
Coefficient of variation (CV)0.467 0.658
Min–max range of strain means233   –   1315   cm 201   –   1570   cm
Mean sample size per strain9.5   mice 9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 273332.5291 273332.5291 4.2918 0.0395
strain 12 19463891.1268 1621990.9272 25.4683 < 0.0001
sex:strain 12 1289725.371 107477.1143 1.6876 0.0709
Residuals 219 13947352.8011 63686.5425


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 233.0 119.0   7 45.0 0.511 71.8, 425.0 -1.38
129S1/SvImJ m 251.0 159.0   7 60.1 0.635 111.0, 578.0 -0.93
A/J f 731.0 122.0   6 49.8 0.167 545.0, 816.0 0.24
A/J m 758.0 303.0   18 71.4 0.4 290.0, 1332.0 0.25
AKR/J f 432.0 245.0   12 70.8 0.567 138.0, 897.0 -0.73
AKR/J m 529.0 263.0   12 75.8 0.496 144.0, 876.0 -0.29
BALB/cByJ f 517.0 202.0   15 52.2 0.391 141.0, 877.0 -0.45
BALB/cByJ m 313.0 216.0   6 88.1 0.69 91.4, 617.0 -0.79
BALB/cJ f 664.0 312.0   14 83.5 0.47 146.0, 1171.0 0.02
BALB/cJ m 684.0 209.0   10 66.0 0.305 380.0, 974.0 0.07
C3H/HeJ f 889.0 274.0   10 86.6 0.308 503.0, 1345.0 0.76
C3H/HeJ m 730.0 292.0   9 97.5 0.4 307.0, 1344.0 0.18
C57BL/6J f 336.0 206.0   7 78.0 0.615 137.0, 716.0 -1.05
C57BL/6J m 201.0 162.0   7 61.3 0.805 95.5, 557.0 -1.05
CAST/EiJ f 536.0 253.0   10 79.9 0.472 133.0, 910.0 -0.39
CAST/EiJ m 485.0 242.0   11 73.1 0.5 226.0, 970.0 -0.39
DBA/2J f 728.0 328.0   6 134.0 0.45 341.0, 1247.0 0.23
DBA/2J m 267.0 93.1   6 38.0 0.349 107.0, 343.0 -0.9
FVB/NJ f 1315.0 527.0   6 215.0 0.401 686.0, 1991.0 2.15
FVB/NJ m 1570.0 375.0   6 153.0 0.239 1223.0, 2224.0 2.14
MOLF/EiJ f 1051.0 308.0   11 92.9 0.293 503.0, 1404.0 1.29
MOLF/EiJ m 1102.0 378.0   4 189.0 0.343 835.0, 1659.0 1.05
SJL/J f 758.0 216.0   12 62.3 0.285 341.0, 964.0 0.33
SJL/J m 584.0 135.0   12 39.0 0.232 426.0, 892.0 -0.16
SM/J f 344.0 204.0   9 67.9 0.592 149.0, 803.0 -1.02
SM/J m 282.0 121.0   12 35.0 0.429 121.0, 495.0 -0.86
SPRET/EiJ m 1370.0 274.0   12 79.2 0.2 890.0, 1715.0 1.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 233.2571 95.3838 421.2449 45.2694
129S1/SvImJ m 250.5714 95.3838 438.5592 62.5837
A/J f 730.8333 103.0263 933.8833 527.7833
A/J m 758.2778 59.4823 875.5087 641.0468
AKR/J f 432.5 72.8506 576.078 288.922
AKR/J m 528.8333 72.8506 672.4114 385.2553
BALB/cByJ f 516.6667 65.1596 645.0868 388.2466
BALB/cByJ m 312.7333 103.0263 515.7833 109.6833
BALB/cJ f 664.1429 67.4466 797.0703 531.2154
BALB/cJ m 683.8 79.8038 841.0818 526.5182
C3H/HeJ f 889.3 79.8038 1046.5818 732.0182
C3H/HeJ m 730.4444 84.1206 896.2341 564.6548
C57BL/6J f 335.7143 95.3838 523.702 147.7265
C57BL/6J m 201.4286 95.3838 389.4163 13.4408
CAST/EiJ f 536.0 79.8038 693.2818 378.7182
CAST/EiJ m 484.8182 76.09 634.7805 334.8558
DBA/2J f 728.0 103.0263 931.05 524.95
DBA/2J m 266.8333 103.0263 469.8833 63.7833
FVB/NJ f 1314.6667 103.0263 1517.7167 1111.6167
FVB/NJ m 1570.5 103.0263 1773.55 1367.45
MOLF/EiJ f 1050.5455 76.09 1200.5078 900.5831
MOLF/EiJ m 1101.75 126.181 1350.4344 853.0656
SJL/J f 758.0 72.8506 901.578 614.422
SJL/J m 584.0 72.8506 727.578 440.422
SM/J f 343.7778 84.1206 509.5674 177.9882
SM/J m 282.4167 72.8506 425.9947 138.8386


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 241.9143 67.4466 374.8417 108.9869
A/J both 744.5556 59.4823 861.7865 627.3246
AKR/J both 480.6667 51.5132 582.1917 379.1417
BALB/cByJ both 414.7 60.9512 534.826 294.574
BALB/cJ both 673.9714 52.2439 776.9366 571.0063
C3H/HeJ both 809.8722 57.9762 924.1348 695.6096
C57BL/6J both 268.5714 67.4466 401.4988 135.644
CAST/EiJ both 510.4091 55.1324 619.0671 401.751
DBA/2J both 497.4167 72.8506 640.9947 353.8386
FVB/NJ both 1442.5833 72.8506 1586.1614 1299.0053
MOLF/EiJ both 1076.1477 73.6738 1221.3482 930.9473
SJL/J both 671.0 51.5132 772.525 569.475
SM/J both 313.0972 55.6406 422.7567 203.4377




  GWAS USING LINEAR MIXED MODELS