Project measure / variable:   Koide1   HP_JUMP

ID, description, units MPD:1810   HP_JUMP   hot plate test: latency to respond by jumping   [s]  
Data set, strains Koide1   wild-derived Mishima   11 strains     sex: f     age: 8-13wks
Procedure nociception assay
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  STRAIN COMPARISON PLOT
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Koide1 - hot plate test: latency to respond by jumping



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means131   s
Median of the strain means114   s
SD of the strain means± 52.2
Coefficient of variation (CV)0.398
Min–max range of strain means62.6   –   219   s
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 271576.5636 27157.6564 10.3706 < 0.0001
Residuals 99 259251.7 2618.704


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BFM/2Ms f 200.0 60.1   10 19.0 0.3 92.0, 289.0 1.32
BLG2/Ms f 116.0 60.7   10 19.2 0.522 46.0, 200.0 -0.29
C57BL/6J f 86.5 52.2   10 16.5 0.603 37.0, 184.0 -0.85
CAST/EiJ f 62.6 26.1   10 8.24 0.416 29.0, 105.0 -1.31
DBA/1J f 148.0 23.4   10 7.39 0.158 108.0, 185.0 0.32
HMI/Ms f 82.0 48.9   10 15.5 0.597 7.0, 146.0 -0.94
JF1/MsJ f 219.0 62.9   10 19.9 0.288 155.0, 300.0 1.68
KJR/Ms f 114.0 24.8   10 7.84 0.218 88.0, 163.0 -0.33
MSM/MsJ f 194.0 62.2   10 19.7 0.321 96.0, 300.0 1.21
NJL/Ms f 109.0 78.4   10 24.8 0.721 20.0, 277.0 -0.42
SWN/Ms f 111.0 23.9   10 7.55 0.214 80.0, 140.0 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 200.0 16.1824 232.1094 167.8906
BLG2/Ms f 116.3 16.1824 148.4094 84.1906
C57BL/6J f 86.5 16.1824 118.6094 54.3906
CAST/EiJ f 62.6 16.1824 94.7094 30.4906
DBA/1J f 147.8 16.1824 179.9094 115.6906
HMI/Ms f 82.0 16.1824 114.1094 49.8906
JF1/MsJ f 218.8 16.1824 250.9094 186.6906
KJR/Ms f 113.9 16.1824 146.0094 81.7906
MSM/MsJ f 193.9 16.1824 226.0094 161.7906
NJL/Ms f 108.8 16.1824 140.9094 76.6906
SWN/Ms f 111.3 16.1824 143.4094 79.1906




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA