Phenotype measure:   Koide1   HP_LICK

ID, description, units MPD:1809   HP_LICK   hot plate test: latency to respond by licking   [s]
Data set, strains Koide1   wild-derived Mishima   11 strains     sex: f     age: 8-13wks
Procedure nociception assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Koide1 - hot plate test: latency to respond by licking



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means37.1   s
Median of the strain means33.7   s
SD of the strain means± 19.0
Coefficient of variation (CV)0.510
Min–max range of strain means16.8   –   74.5   s
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 35924.6727 3592.4673 9.2275 < 0.0001
Residuals 99 38543.0 389.3232


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BFM/2Ms f 33.7 7.17   10 2.27 0.213 20.0, 45.0 -0.18
BLG2/Ms f 34.0 27.1   10 8.56 0.796 18.0, 103.0 -0.17
C57BL/6J f 16.8 2.57   10 0.814 0.153 12.0, 20.0 -1.07
CAST/EiJ f 18.7 9.15   10 2.89 0.489 10.0, 37.0 -0.97
DBA/1J f 24.8 9.37   10 2.96 0.378 9.0, 34.0 -0.65
HMI/Ms f 21.9 9.43   10 2.98 0.431 8.0, 40.0 -0.8
JF1/MsJ f 74.5 35.0   10 11.1 0.469 33.0, 130.0 1.97
KJR/Ms f 59.9 24.3   10 7.68 0.406 29.0, 89.0 1.2
MSM/MsJ f 38.8 18.4   10 5.82 0.475 19.0, 76.0 0.09
NJL/Ms f 27.7 6.78   10 2.15 0.245 16.0, 35.0 -0.5
SWN/Ms f 57.8 32.2   10 10.2 0.556 30.0, 140.0 1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 33.7 6.2396 46.0807 21.3193
BLG2/Ms f 34.0 6.2396 46.3807 21.6193
C57BL/6J f 16.8 6.2396 29.1807 4.4193
CAST/EiJ f 18.7 6.2396 31.0807 6.3193
DBA/1J f 24.8 6.2396 37.1807 12.4193
HMI/Ms f 21.9 6.2396 34.2807 9.5193
JF1/MsJ f 74.5 6.2396 86.8807 62.1193
KJR/Ms f 59.9 6.2396 72.2807 47.5193
MSM/MsJ f 38.8 6.2396 51.1807 26.4193
NJL/Ms f 27.7 6.2396 40.0807 15.3193
SWN/Ms f 57.8 6.2396 70.1807 45.4193




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA