Project measure / variable:   Koide1   TF

ID, description, units MPD:1808   TF   tail flick test: latency to respond   [s]  
Data set, strains Koide1   wild-derived Mishima   11 strains     sex: f     age: 8-13wks
Procedure nociception assay
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  STRAIN COMPARISON PLOT
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Koide1 - tail flick test: latency to respond



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means6.48   s
Median of the strain means4.42   s
SD of the strain means± 3.69
Coefficient of variation (CV)0.569
Min–max range of strain means2.55   –   13.6   s
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 1367.3394 136.7339 16.0478 < 0.0001
Residuals 99 843.5225 8.5204


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BFM/2Ms f 4.25 2.2   10 0.697 0.519 2.6, 9.1 -0.61
BLG2/Ms f 9.37 4.11   10 1.3 0.439 3.4, 15.0 0.78
C57BL/6J f 2.55 0.415   10 0.131 0.163 1.95, 3.4 -1.07
CAST/EiJ f 3.94 1.78   10 0.564 0.452 2.25, 7.2 -0.69
DBA/1J f 3.35 1.09   10 0.344 0.325 2.35, 6.1 -0.85
HMI/Ms f 4.42 2.28   10 0.722 0.517 3.0, 9.3 -0.56
JF1/MsJ f 10.7 3.42   10 1.08 0.318 4.95, 15.0 1.14
KJR/Ms f 13.6 3.52   10 1.11 0.258 3.9, 15.0 1.93
MSM/MsJ f 9.06 4.61   10 1.46 0.509 3.65, 15.0 0.7
NJL/Ms f 3.11 0.902   10 0.285 0.29 1.8, 4.4 -0.91
SWN/Ms f 6.95 4.0   10 1.27 0.576 3.6, 15.0 0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 4.25 0.9231 6.0816 2.4184
BLG2/Ms f 9.365 0.9231 11.1966 7.5334
C57BL/6J f 2.555 0.9231 4.3866 0.7234
CAST/EiJ f 3.94 0.9231 5.7716 2.1084
DBA/1J f 3.355 0.9231 5.1866 1.5234
HMI/Ms f 4.415 0.9231 6.2466 2.5834
JF1/MsJ f 10.745 0.9231 12.5766 8.9134
KJR/Ms f 13.63 0.9231 15.4616 11.7984
MSM/MsJ f 9.06 0.9231 10.8916 7.2284
NJL/Ms f 3.11 0.9231 4.9416 1.2784
SWN/Ms f 6.955 0.9231 8.7866 5.1234




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA