Phenotype measure:   Koide1   PA_LEARNED

ID, description, units MPD:1807   PA_LEARNED   passive avoidance test: learned fear response, latency to enter box next day   [s]
Data set, strains Koide1   wild-derived Mishima   11 strains     sex: f     age: 8-13wks
Procedure avoidance test
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Koide1 - passive avoidance test: learned fear response, latency to enter box next day



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means195   s
Median of the strain means196   s
SD of the strain means± 91.0
Coefficient of variation (CV)0.466
Min–max range of strain means22.1   –   300   s
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 827041.2545 82704.1255 9.7629 < 0.0001
Residuals 99 838657.8 8471.2909


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BFM/2Ms f 300.0 0.0   10 0.0 0.0 300.0, 300.0 1.15
BLG2/Ms f 94.1 120.0   10 38.0 1.28 11.0, 300.0 -1.11
C57BL/6J f 259.0 81.7   10 25.8 0.316 55.0, 300.0 0.7
CAST/EiJ f 22.1 14.3   10 4.53 0.648 2.0, 44.0 -1.9
DBA/1J f 196.0 130.0   10 41.0 0.663 3.0, 300.0 0.01
HMI/Ms f 141.0 131.0   10 41.5 0.928 1.0, 300.0 -0.59
JF1/MsJ f 193.0 108.0   10 34.0 0.558 38.0, 300.0 -0.02
KJR/Ms f 290.0 24.2   10 7.64 0.0832 224.0, 300.0 1.04
MSM/MsJ f 263.0 82.7   10 26.2 0.314 55.0, 300.0 0.75
NJL/Ms f 120.0 103.0   10 32.7 0.859 1.0, 286.0 -0.83
SWN/Ms f 268.0 90.2   10 28.5 0.337 13.0, 300.0 0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 300.0 29.1055 357.7516 242.2484
BLG2/Ms f 94.1 29.1055 151.8516 36.3484
C57BL/6J f 258.9 29.1055 316.6516 201.1484
CAST/EiJ f 22.1 29.1055 79.8516 0.0
DBA/1J f 195.7 29.1055 253.4516 137.9484
HMI/Ms f 141.3 29.1055 199.0516 83.5484
JF1/MsJ f 192.8 29.1055 250.5516 135.0484
KJR/Ms f 290.4 29.1055 348.1516 232.6484
MSM/MsJ f 263.2 29.1055 320.9516 205.4484
NJL/Ms f 120.4 29.1055 178.1516 62.6484
SWN/Ms f 267.9 29.1055 325.6516 210.1484




GWAS analysis not available: At least 12 strains are required