Project measure / variable:   Justice2   pctM

ID, description, units MPD:13216   pctM   monocyte differential (MONO; percentage of total WBC)   [%]  
Data set, strains Justice2   inbred   16 strains     sex: both     age: 12-16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Justice2 - monocyte differential (MONO; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means1.88   % 2.18   %
Median of the strain means1.68   % 2.01   %
SD of the strain means± 0.992 ± 1.000
Coefficient of variation (CV)0.528 0.458
Min–max range of strain means0.730   –   4.97   % 0.938   –   4.55   %
Mean sample size per strain12.6   mice 12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.3111 11.3111 3.5907 0.0589
strain 15 300.6658 20.0444 6.363 < 0.0001
sex:strain 15 77.223 5.1482 1.6343 0.0627
Residuals 366 1152.9552 3.1502


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.96 0.883   15 0.228 0.92 0.1, 3.8 -0.93
129S1/SvImJ m 2.61 1.9   15 0.491 0.73 0.43
129S6/SvEvTac f 1.54 0.786   10 0.249 0.511 0.8, 3.6 -0.34
129S6/SvEvTac m 1.28 0.421   10 0.133 0.329 0.8, 2.3 -0.9
A/J f 2.72 2.36   10 0.745 0.866 0.3, 8.6 0.85
A/J m 0.938 0.67   8 0.237 0.714 0.2, 1.9 -1.24
BALB/cByJ f 1.24 0.639   15 0.165 0.515 0.3, 2.4 -0.64
BALB/cByJ m 1.92 1.29   15 0.334 0.674 0.5, 5.3 -0.26
BALB/cJ f 1.97 0.739   10 0.234 0.375 0.4, 3.0 0.09
BALB/cJ m 1.42 0.915   9 0.305 0.643 0.3, 3.5 -0.76
BTBR T+ Itpr3tf/J f 2.51 0.758   10 0.24 0.302 1.4, 4.0 0.64
BTBR T+ Itpr3tf/J m 2.26 1.49   10 0.47 0.657 0.2, 4.9 0.08
C3HeB/FeJ f 1.33 0.855   15 0.221 0.645 0.2, 2.9 -0.55
C3HeB/FeJ m 2.09 1.09   15 0.283 0.523 0.2, 3.7 -0.09
C3H/HeJ f 2.28 0.718   10 0.227 0.315 1.2, 3.1 0.4
C3H/HeJ m 3.91 1.2   10 0.379 0.306 2.0, 6.0 1.73
C57BL/10J f 1.82 1.74   13 0.482 0.954 0.4, 6.6 -0.06
C57BL/10J m 2.15 1.4   15 0.362 0.651 0.1, 4.5 -0.03
C57BL/6J f 1.35 0.833   15 0.215 0.619 0.2, 3.0 -0.53
C57BL/6J m 1.84 2.39   14 0.638 1.3 0.2, 7.2 -0.34
CAST/EiJ f 0.73 0.514   10 0.163 0.705 0.3, 2.1 -1.16
CAST/EiJ m 1.21 0.66   9 0.22 0.545 0.6, 2.6 -0.97
CBA/CaJ f 1.88 1.83   14 0.489 0.975 0.2, 7.0 0.0
CBA/CaJ m 2.07 2.5   14 0.667 1.21 0.3, 8.7 -0.11
CBA/J f 1.38 0.616   10 0.195 0.446 0.9, 2.7 -0.5
CBA/J m 3.36 2.39   9 0.796 0.712 1.3, 8.2 1.18
DBA/2J f 4.97 5.41   15 1.4 1.09 0.1, 17.0 3.12
DBA/2J m 4.55 3.46   14 0.924 0.76 0.1, 11.9 2.37
FVB/NJ f 1.27 0.396   15 0.102 0.312 0.2, 1.8 -0.61
FVB/NJ m 1.95 1.17   15 0.302 0.601 0.8, 5.5 -0.23
SJL/J f 2.1 0.632   15 0.163 0.301 0.9, 3.0 0.22
SJL/J m 1.36 0.413   14 0.11 0.302 0.9, 2.1 -0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.96 0.4583 1.8612 0.0588
129S1/SvImJ m 2.6067 0.4583 3.5078 1.7055
129S6/SvEvTac f 1.54 0.5613 2.6437 0.4363
129S6/SvEvTac m 1.28 0.5613 2.3837 0.1763
A/J f 2.72 0.5613 3.8237 1.6163
A/J m 0.9375 0.6275 2.1715 0.0
BALB/cByJ f 1.24 0.4583 2.1412 0.3388
BALB/cByJ m 1.92 0.4583 2.8212 1.0188
BALB/cJ f 1.97 0.5613 3.0737 0.8663
BALB/cJ m 1.4222 0.5916 2.5856 0.2588
BTBR T+ Itpr3tf/J f 2.51 0.5613 3.6137 1.4063
BTBR T+ Itpr3tf/J m 2.26 0.5613 3.3637 1.1563
C3HeB/FeJ f 1.3253 0.4583 2.2265 0.4242
C3HeB/FeJ m 2.0933 0.4583 2.9945 1.1922
C3H/HeJ f 2.28 0.5613 3.3837 1.1763
C3H/HeJ m 3.91 0.5613 5.0137 2.8063
C57BL/10J f 1.8231 0.4923 2.7911 0.8551
C57BL/10J m 2.1533 0.4583 3.0545 1.2522
C57BL/6J f 1.3467 0.4583 2.2478 0.4455
C57BL/6J m 1.8429 0.4744 2.7757 0.9101
CAST/EiJ f 0.73 0.5613 1.8337 0.0
CAST/EiJ m 1.2111 0.5916 2.3745 0.0477
CBA/CaJ f 1.8786 0.4744 2.8114 0.9458
CBA/CaJ m 2.0714 0.4744 3.0042 1.1386
CBA/J f 1.38 0.5613 2.4837 0.2763
CBA/J m 3.3556 0.5916 4.519 2.1922
DBA/2J f 4.9733 0.4583 5.8745 4.0722
DBA/2J m 4.55 0.4744 5.4828 3.6172
FVB/NJ f 1.2667 0.4583 2.1678 0.3655
FVB/NJ m 1.9467 0.4583 2.8478 1.0455
SJL/J f 2.1 0.4583 3.0012 1.1988
SJL/J m 1.3643 0.4744 2.2971 0.4315


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.7833 0.324 2.4206 1.1461
129S6/SvEvTac both 1.41 0.3969 2.1904 0.6296
A/J both 1.8288 0.4209 2.6565 1.001
BALB/cByJ both 1.58 0.324 2.2172 0.9428
BALB/cJ both 1.6961 0.4077 2.4979 0.8943
BTBR T+ Itpr3tf/J both 2.385 0.3969 3.1654 1.6046
C3HeB/FeJ both 1.7093 0.324 2.3466 1.0721
C3H/HeJ both 3.095 0.3969 3.8754 2.3146
C57BL/10J both 1.9882 0.3363 2.6495 1.3269
C57BL/6J both 1.5948 0.3298 2.2433 0.9463
CAST/EiJ both 0.9706 0.4077 1.7724 0.1687
CBA/CaJ both 1.975 0.3354 2.6346 1.3154
CBA/J both 2.3678 0.4077 3.1696 1.566
DBA/2J both 4.7617 0.3298 5.4102 4.1132
FVB/NJ both 1.6067 0.324 2.2439 0.9694
SJL/J both 1.7321 0.3298 2.3806 1.0836




  GWAS USING LINEAR MIXED MODELS