Phenotype measure:   Justice2   pctN

ID, description, units MPD:13214   pctN   neutrophil differential (NEUT; percentage of total WBC)   [%]
Data set, strains Justice2   inbred   16 strains     sex: both     age: 12-16wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Justice2 - neutrophil differential (NEUT; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means11.7   % 12.8   %
Median of the strain means11.2   % 13.2   %
SD of the strain means± 3.66 ± 4.28
Coefficient of variation (CV)0.312 0.335
Min–max range of strain means6.14   –   19.6   % 5.84   –   21.7   %
Mean sample size per strain12.6   mice 12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 89.6958 89.6958 8.9479 0.003
strain 15 5191.6951 346.113 34.5276 < 0.0001
sex:strain 15 341.3483 22.7566 2.2702 0.0045
Residuals 365 3658.8458 10.0242


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 10.5 2.28   15 0.589 0.217 5.3, 15.5 -0.34
129S1/SvImJ m 14.0 2.94   15 0.76 0.21 9.2, 18.9 0.29
129S6/SvEvTac f 13.3 2.11   10 0.666 0.158 10.5, 18.3 0.43
129S6/SvEvTac m 12.5 3.69   10 1.17 0.296 8.4, 21.4 -0.06
A/J f 11.4 2.95   10 0.934 0.26 7.2, 15.1 -0.09
A/J m 11.4 5.98   8 2.12 0.526 3.8, 19.8 -0.32
BALB/cByJ f 11.1 3.35   15 0.864 0.301 6.0, 17.2 -0.17
BALB/cByJ m 13.6 2.95   15 0.761 0.216 9.2, 18.3 0.2
BALB/cJ f 14.8 3.09   10 0.976 0.208 10.8, 19.6 0.84
BALB/cJ m 20.2 3.36   9 1.12 0.166 15.3, 25.2 1.74
BTBR T+ Itpr3tf/J f 13.5 1.87   10 0.591 0.138 9.9, 16.3 0.48
BTBR T+ Itpr3tf/J m 14.5 2.39   10 0.756 0.165 9.1, 17.5 0.41
C3HeB/FeJ f 14.9 2.42   15 0.626 0.162 10.8, 19.0 0.87
C3HeB/FeJ m 15.2 3.61   15 0.931 0.237 6.9, 22.0 0.57
C3H/HeJ f 19.6 3.88   10 1.23 0.197 14.1, 23.9 2.15
C3H/HeJ m 21.7 4.04   10 1.28 0.186 14.6, 27.8 2.09
C57BL/10J f 6.14 1.3   13 0.362 0.213 4.1, 8.7 -1.53
C57BL/10J m 5.92 1.19   15 0.308 0.201 3.8, 7.9 -1.6
C57BL/6J f 7.67 1.86   15 0.48 0.242 5.7, 12.6 -1.11
C57BL/6J m 9.53 3.62   14 0.966 0.379 5.6, 17.8 -0.75
CAST/EiJ f 6.72 0.748   9 0.249 0.111 5.5, 7.7 -1.37
CAST/EiJ m 8.66 3.18   9 1.06 0.368 4.3, 12.6 -0.96
CBA/CaJ f 14.5 3.36   14 0.897 0.232 8.0, 21.3 0.76
CBA/CaJ m 13.0 3.66   14 0.977 0.281 7.4, 19.2 0.06
CBA/J f 14.9 2.94   10 0.928 0.197 8.7, 19.0 0.87
CBA/J m 13.5 5.1   9 1.7 0.379 4.7, 21.7 0.17
DBA/2J f 11.1 5.23   15 1.35 0.472 4.3, 18.1 -0.17
DBA/2J m 13.5 5.24   14 1.4 0.388 5.4, 20.7 0.17
FVB/NJ f 10.2 2.17   15 0.559 0.212 6.9, 12.8 -0.42
FVB/NJ m 11.0 2.19   15 0.564 0.198 6.5, 16.3 -0.41
SJL/J f 7.45 1.63   15 0.422 0.219 5.4, 10.3 -1.17
SJL/J m 5.84 1.52   14 0.406 0.26 3.8, 8.4 -1.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 10.5 0.8175 12.1076 8.8924
129S1/SvImJ m 14.02 0.8175 15.6276 12.4124
129S6/SvEvTac f 13.35 1.0012 15.3189 11.3811
129S6/SvEvTac m 12.46 1.0012 14.4289 10.4911
A/J f 11.37 1.0012 13.3389 9.4011
A/J m 11.375 1.1194 13.5763 9.1737
BALB/cByJ f 11.12 0.8175 12.7276 9.5124
BALB/cByJ m 13.64 0.8175 15.2476 12.0324
BALB/cJ f 14.83 1.0012 16.7989 12.8611
BALB/cJ m 20.2111 1.0554 22.2865 18.1357
BTBR T+ Itpr3tf/J f 13.52 1.0012 15.4889 11.5511
BTBR T+ Itpr3tf/J m 14.53 1.0012 16.4989 12.5611
C3HeB/FeJ f 14.9267 0.8175 16.5342 13.3191
C3HeB/FeJ m 15.2 0.8175 16.8076 13.5924
C3H/HeJ f 19.63 1.0012 21.5989 17.6611
C3H/HeJ m 21.69 1.0012 23.6589 19.7211
C57BL/10J f 6.1385 0.8781 7.8653 4.4117
C57BL/10J m 5.92 0.8175 7.5276 4.3124
C57BL/6J f 7.6733 0.8175 9.2809 6.0658
C57BL/6J m 9.5286 0.8462 11.1926 7.8646
CAST/EiJ f 6.7222 1.0554 8.7976 4.6469
CAST/EiJ m 8.6556 1.0554 10.7309 6.5802
CBA/CaJ f 14.4857 0.8462 16.1497 12.8217
CBA/CaJ m 13.0214 0.8462 14.6854 11.3574
CBA/J f 14.87 1.0012 16.8389 12.9011
CBA/J m 13.4556 1.0554 15.5309 11.3802
DBA/2J f 11.0933 0.8175 12.7009 9.4858
DBA/2J m 13.5 0.8462 15.164 11.836
FVB/NJ f 10.2 0.8175 11.8076 8.5924
FVB/NJ m 11.0133 0.8175 12.6209 9.4058
SJL/J f 7.4467 0.8175 9.0542 5.8391
SJL/J m 5.8357 0.8462 7.4997 4.1717


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 12.26 0.578 13.3967 11.1233
129S6/SvEvTac both 12.905 0.708 14.2972 11.5128
A/J both 11.3725 0.7509 12.8491 9.8959
BALB/cByJ both 12.38 0.578 13.5167 11.2433
BALB/cJ both 17.5206 0.7274 18.9509 16.0902
BTBR T+ Itpr3tf/J both 14.025 0.708 15.4172 12.6328
C3HeB/FeJ both 15.0633 0.578 16.2001 13.9266
C3H/HeJ both 20.66 0.708 22.0522 19.2678
C57BL/10J both 6.0292 0.5999 7.2089 4.8496
C57BL/6J both 8.601 0.5883 9.7578 7.4441
CAST/EiJ both 7.6889 0.7463 9.1564 6.2214
CBA/CaJ both 13.7536 0.5983 14.9302 12.5769
CBA/J both 14.1628 0.7274 15.5931 12.7324
DBA/2J both 12.2967 0.5883 13.4535 11.1398
FVB/NJ both 10.6067 0.578 11.7434 9.4699
SJL/J both 6.6412 0.5883 7.798 5.4843




  GWAS USING LINEAR MIXED MODELS