Project measure / variable:   Justice2   HGB

ID, description, units MPD:13206   HGB   hemoglobin (HGB)   [g/dL]  
Data set, strains Justice2   inbred   16 strains     sex: both     age: 12-16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Justice2 - hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means15.1   g/dL 14.7   g/dL
Median of the strain means14.9   g/dL 14.8   g/dL
SD of the strain means± 0.588 ± 0.578
Coefficient of variation (CV)0.0391 0.0392
Min–max range of strain means14.2   –   16.2   g/dL 13.7   –   16.0   g/dL
Mean sample size per strain12.6   mice 12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.6319 11.6319 55.9737 < 0.0001
strain 15 130.4275 8.6952 41.8417 < 0.0001
sex:strain 15 12.3092 0.8206 3.9489 < 0.0001
Residuals 365 75.851 0.2078


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.2 0.364   15 0.094 0.0224 15.4, 16.7 1.92
129S1/SvImJ m 16.0 0.483   15 0.125 0.0302 14.7, 16.7 2.18
129S6/SvEvTac f 15.5 0.394   10 0.125 0.0254 14.7, 16.0 0.73
129S6/SvEvTac m 14.9 1.16   10 0.365 0.0774 12.2, 16.2 0.28
A/J f 15.0 0.341   10 0.108 0.0226 14.5, 15.4 -0.12
A/J m 14.5 0.469   8 0.166 0.0325 13.9, 15.3 -0.41
BALB/cByJ f 16.0 0.449   15 0.116 0.0281 15.1, 16.7 1.58
BALB/cByJ m 15.2 0.451   15 0.116 0.0297 13.9, 15.8 0.8
BALB/cJ f 15.5 0.307   10 0.0971 0.0198 15.0, 15.9 0.73
BALB/cJ m 14.8 0.545   9 0.182 0.0369 14.0, 15.7 0.11
BTBR T+ Itpr3tf/J f 14.7 0.231   10 0.0731 0.0157 14.4, 15.0 -0.63
BTBR T+ Itpr3tf/J m 14.5 0.35   10 0.111 0.0242 14.0, 14.9 -0.41
C3HeB/FeJ f 14.7 0.501   15 0.129 0.034 13.4, 15.8 -0.63
C3HeB/FeJ m 14.7 0.36   15 0.093 0.0245 14.0, 15.3 -0.06
C3H/HeJ f 14.8 0.35   10 0.111 0.0238 14.3, 15.2 -0.46
C3H/HeJ m 14.6 0.569   10 0.18 0.0389 13.8, 15.3 -0.24
C57BL/10J f 14.6 0.323   13 0.0895 0.0221 14.0, 15.1 -0.8
C57BL/10J m 14.1 0.373   15 0.0963 0.0265 13.4, 14.7 -1.1
C57BL/6J f 15.4 0.336   15 0.0867 0.0217 14.9, 15.9 0.56
C57BL/6J m 14.8 0.483   14 0.129 0.0325 13.5, 15.6 0.11
CAST/EiJ f 15.4 0.31   9 0.103 0.0201 14.9, 15.8 0.56
CAST/EiJ m 15.5 0.433   9 0.144 0.0279 15.0, 16.1 1.32
CBA/CaJ f 15.5 0.369   14 0.0986 0.0238 14.8, 16.0 0.73
CBA/CaJ m 15.2 0.492   14 0.132 0.0323 14.4, 16.0 0.8
CBA/J f 14.3 0.416   10 0.132 0.0292 13.7, 15.0 -1.31
CBA/J m 14.2 0.371   9 0.124 0.0262 13.5, 14.7 -0.93
DBA/2J f 14.7 0.307   15 0.0792 0.0209 14.2, 15.2 -0.63
DBA/2J m 15.0 0.639   14 0.171 0.0427 14.3, 16.6 0.45
FVB/NJ f 14.2 0.436   15 0.112 0.0307 13.2, 14.8 -1.48
FVB/NJ m 14.1 0.353   15 0.0913 0.0251 13.4, 14.6 -1.1
SJL/J f 14.6 0.498   15 0.129 0.0341 13.6, 15.3 -0.8
SJL/J m 13.7 0.459   14 0.123 0.0336 12.8, 14.3 -1.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.2467 0.1177 16.4781 16.0152
129S1/SvImJ m 15.98 0.1177 16.2115 15.7485
129S6/SvEvTac f 15.5 0.1442 15.7835 15.2165
129S6/SvEvTac m 14.92 0.1442 15.2035 14.6365
A/J f 15.04 0.1442 15.3235 14.7565
A/J m 14.45 0.1612 14.7669 14.1331
BALB/cByJ f 16.0 0.1177 16.2315 15.7685
BALB/cByJ m 15.18 0.1177 15.4115 14.9485
BALB/cJ f 15.49 0.1442 15.7735 15.2065
BALB/cJ m 14.7667 0.152 15.0655 14.4679
BTBR T+ Itpr3tf/J f 14.73 0.1442 15.0135 14.4465
BTBR T+ Itpr3tf/J m 14.45 0.1442 14.7335 14.1665
C3HeB/FeJ f 14.74 0.1177 14.9715 14.5085
C3HeB/FeJ m 14.7133 0.1177 14.9448 14.4819
C3H/HeJ f 14.75 0.1442 15.0335 14.4665
C3H/HeJ m 14.62 0.1442 14.9035 14.3365
C57BL/10J f 14.5923 0.1264 14.8409 14.3437
C57BL/10J m 14.1067 0.1177 14.3381 13.8752
C57BL/6J f 15.4467 0.1177 15.6781 15.2152
C57BL/6J m 14.8286 0.1218 15.0682 14.589
CAST/EiJ f 15.3889 0.152 15.6877 15.0901
CAST/EiJ m 15.5333 0.152 15.8321 15.2345
CBA/CaJ f 15.4714 0.1218 15.711 15.2318
CBA/CaJ m 15.2357 0.1218 15.4753 14.9961
CBA/J f 14.27 0.1442 14.5535 13.9865
CBA/J m 14.1667 0.152 14.4655 13.8679
DBA/2J f 14.66 0.1177 14.8915 14.4285
DBA/2J m 14.9571 0.1218 15.1967 14.7176
FVB/NJ f 14.1867 0.1177 14.4181 13.9552
FVB/NJ m 14.1067 0.1177 14.3381 13.8752
SJL/J f 14.6067 0.1177 14.8381 14.3752
SJL/J m 13.65 0.1218 13.8896 13.4104


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 16.1133 0.0832 16.277 15.9497
129S6/SvEvTac both 15.21 0.1019 15.4105 15.0095
A/J both 14.745 0.1081 14.9576 14.5324
BALB/cByJ both 15.59 0.0832 15.7537 15.4263
BALB/cJ both 15.1283 0.1047 15.3343 14.9224
BTBR T+ Itpr3tf/J both 14.59 0.1019 14.7905 14.3895
C3HeB/FeJ both 14.7267 0.0832 14.8903 14.563
C3H/HeJ both 14.685 0.1019 14.8855 14.4845
C57BL/10J both 14.3495 0.0864 14.5193 14.1796
C57BL/6J both 15.1376 0.0847 15.3042 14.9711
CAST/EiJ both 15.4611 0.1074 15.6724 15.2498
CBA/CaJ both 15.3536 0.0861 15.523 15.1842
CBA/J both 14.2183 0.1047 14.4243 14.0124
DBA/2J both 14.8086 0.0847 14.9751 14.642
FVB/NJ both 14.1467 0.0832 14.3103 13.983
SJL/J both 14.1283 0.0847 14.2949 13.9618




  GWAS USING LINEAR MIXED MODELS