Project measure / variable:   Project1217   PAU_3

ID, description, units MPD:131856   PAU_3   Index of constriction    T15-T30  
Data set, strains Project1217   other   8 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1217 - Index of constriction T15-T30



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means2.6718   None 2.9717   None
Median of the strain means1.9721   None 2.2426   None
SD of the strain means± 1.5603 ± 1.5065
Coefficient of variation (CV)0.584 0.5069
Min–max range of strain means1.1909   –   5.7547   None 1.4832   –   5.4332   None
Mean sample size per strain7.5   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.7028 5.7028 3.684 0.0579
strain 6 214.3892 35.7315 23.0826 < 0.0001
sex:strain 6 4.6256 0.7709 0.498 0.8084
Residuals 96 148.6068 1.548


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.9435 1.6378   9 0.54594 0.4153 0.99489, 6.1126 0.82
129S1/SvImJ m 4.6202 1.4649   8 0.51794 0.3171 3.3048, 7.4123 1.09
A/J f 1.663 0.35961   9 0.11987 0.2162 1.2742, 2.4399 -0.65
A/J m 1.4832 0.61799   5 0.27637 0.4167 1.1417, 2.5759 -0.99
C57BL/6J f 2.0318 0.58993   8 0.20857 0.2903 1.3128, 3.2576 -0.41
C57BL/6J m 2.4274 0.75395   8 0.26656 0.3106 1.4534, 3.6312 -0.36
CAST/EiJ f 1.5402 0.08514   2   0.0602 0.0553 1.48, 1.6004 -0.73
CAST/EiJ m 1.6747 0.0   1   0.0 0.0 1.6747, 1.6747 -0.86
NOD/ShiLtJ f 1.1909 0.11538   9 0.03846 0.0969 1.0412, 1.4017 -0.95
NOD/ShiLtJ m 2.0208 1.681   8 0.59432 0.8318 0.90443, 5.6355 -0.63
NZO/HlLtJ f 3.3378 1.7606   8 0.62248 0.5275 1.3893, 5.5419 0.43
NZO/HlLtJ m 4.0564 1.9018   8 0.6724 0.4688 1.0299, 5.9721 0.72
PWK/PhJ f 5.7547 1.2445   7 0.47038 0.2163 4.3011, 7.4805 1.98
PWK/PhJ m 5.4332 1.8669   7 0.70563 0.3436 3.6823, 8.3161 1.63
WSB/EiJ f 1.9124 0.58319   8 0.20619 0.305 1.2944, 2.8826 -0.49
WSB/EiJ m 2.0577 0.72278   8 0.25554 0.3513 1.3334, 3.5902 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 5.7546857143 0.4702563575 6.6881372064 4.8212342222
129S1/SvImJ 2 5.4332 0.4702563575 6.3666514921 4.4997485079
A/J 1 3.94351 0.4147271248 4.7667368364 3.1202831636
A/J 2 4.62025 0.4398845435 5.4934139177 3.7470860823
BALB/cJ 1 1.6629666667 0.4147271248 2.486193503 0.8397398303
BALB/cJ 2 1.48318 0.5564148259 2.5876547002 0.3787052998
BTBR T+ Itpr3tf/J 1 3.3377875 0.4398845435 4.2109514177 2.4646235823
BTBR T+ Itpr3tf/J 2 4.0563625 0.4398845435 4.9295264177 3.1831985823
C3H/HeJ 1 1.912375 0.4398845435 2.7855389177 1.0392110823
C3H/HeJ 2 2.0576625 0.4398845435 2.9308264177 1.1844985823
C57BL/6J 1 2.0318125 0.4398845435 2.9049764177 1.1586485823
C57BL/6J 2 2.427425 0.4398845435 3.3005889177 1.5542610823
CAST/EiJ 1 1.1909444444 0.4147271248 2.0141712808 0.3677176081
CAST/EiJ 2 2.02081875 0.4398845435 2.8939826677 1.1476548323


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.5939428571 0.3325214593 6.2539927371 4.9338929772
A/J both 4.28188 0.3022817393 4.8819045102 3.6818554898
BALB/cJ both 1.5730733333 0.3469856073 2.2618343201 0.8843123466
BTBR T+ Itpr3tf/J both 3.697075 0.3110453436 4.3144951273 3.0796548727
C3H/HeJ both 1.98501875 0.3110453436 2.6024388773 1.3675986227
C57BL/6J both 2.22961875 0.3110453436 2.8470388773 1.6121986227
CAST/EiJ both 1.6058815972 0.3022817393 2.2059061074 1.0058570871




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA