Project measure / variable:   Project1217   SBC_1

ID, description, units MPD:131834   SBC_1   SBC    Baseline  
Data set, strains Project1217   other   8 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1217 - SBC Baseline



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means18.086   None 18.138   None
Median of the strain means17.832   None 18.709   None
SD of the strain means± 1.6016 ± 1.9016
Coefficient of variation (CV)0.0886 0.1048
Min–max range of strain means16.056   –   20.089   None 14.9   –   20.738   None
Mean sample size per strain7.5   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.9656 0.9656 0.2258 0.6357
strain 6 325.5863 54.2644 12.688 < 0.0001
sex:strain 6 14.0965 2.3494 0.5493 0.7694
Residuals 96 410.5752 4.2768


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.089 1.0799   9 0.35996 0.0538 17.7, 21.2 1.25
129S1/SvImJ m 19.4 0.69488   8 0.24568 0.0358 18.3, 20.6 0.66
A/J f 17.822 1.6262   9 0.54206 0.0912 15.0, 19.9 -0.16
A/J m 17.72 2.8446   5 1.2722 0.1605 13.0, 20.6 -0.22
C57BL/6J f 19.438 1.9063   8 0.67399 0.0981 15.9, 22.4 0.84
C57BL/6J m 18.775 1.0166   8 0.35944 0.0541 17.4, 20.2 0.34
CAST/EiJ f 17.2 0.56569   2   0.4 0.0329 16.8, 17.6 -0.55
CAST/EiJ m 19.0 0.0   1   0.0 0.0 19.0, 19.0 0.45
NOD/ShiLtJ f 16.056 1.4901   9 0.49669 0.0928 14.1, 18.7 -1.27
NOD/ShiLtJ m 15.925 2.4324   8 0.85997 0.1527 12.8, 19.7 -1.16
NZO/HlLtJ f 20.0 1.608   8 0.56852 0.0804 17.6, 21.9 1.2
NZO/HlLtJ m 20.738 3.6138   8 1.2777 0.1743 14.9, 24.6 1.37
PWK/PhJ f 17.843 0.4315   7 0.16309 0.0242 17.1, 18.4 -0.15
PWK/PhJ m 18.643 1.549   7 0.58548 0.0831 16.6, 21.0 0.27
WSB/EiJ f 16.237 2.2576   8 0.7982 0.139 12.7, 20.6 -1.15
WSB/EiJ m 14.9 3.621   8 1.2802 0.243 9.5, 20.5 -1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 17.8428571429 0.7816489004 19.3944179473 16.2912963384
129S1/SvImJ 2 18.6428571429 0.7816489004 20.1944179473 17.0912963384
A/J 1 20.0888888889 0.6893495344 21.4572368998 18.720540878
A/J 2 19.4 0.7311655955 20.8513522363 17.9486477637
BALB/cJ 1 17.8222222222 0.6893495344 19.1905702331 16.4538742113
BALB/cJ 2 17.72 0.9248594515 19.5558315015 15.8841684985
BTBR T+ Itpr3tf/J 1 20.0 0.7311655955 21.4513522363 18.5486477637
BTBR T+ Itpr3tf/J 2 20.7375 0.7311655955 22.1888522363 19.2861477637
C3H/HeJ 1 16.2375 0.7311655955 17.6888522363 14.7861477637
C3H/HeJ 2 14.9 0.7311655955 16.3513522363 13.4486477637
C57BL/6J 1 19.4375 0.7311655955 20.8888522363 17.9861477637
C57BL/6J 2 18.775 0.7311655955 20.2263522363 17.3236477637
CAST/EiJ 1 16.0555555556 0.6893495344 17.4239035664 14.6872075447
CAST/EiJ 2 15.925 0.7311655955 17.3763522363 14.4736477637


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.2428571429 0.552709238 19.3399763091 17.1457379766
A/J both 19.7444444444 0.5024454967 20.7417908728 18.7470980161
BALB/cJ both 17.7711111111 0.5767511997 18.9159531942 16.626269028
BTBR T+ Itpr3tf/J both 20.36875 0.5170121508 21.3950110082 19.3424889918
C3H/HeJ both 15.56875 0.5170121508 16.5950110082 14.5424889918
C57BL/6J both 19.10625 0.5170121508 20.1325110082 18.0799889918
CAST/EiJ both 15.9902777778 0.5024454967 16.9876242061 14.9929313494




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA