Project measure / variable:   Project1217   pH_1

ID, description, units MPD:131754   pH_1   pH    Baseline  
Data set, strains Project1217   other   8 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1217 - pH Baseline



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means7.3672   None 7.3356   None
Median of the strain means7.3605   None 7.3475   None
SD of the strain means± 0.03157 ± 0.04386
Coefficient of variation (CV)0.0043 0.006
Min–max range of strain means7.3301   –   7.4131   None 7.2655   –   7.3866   None
Mean sample size per strain7.5   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0363 0.0363 7.1849 0.0087
strain 6 0.1449 0.0241 4.7805 0.0003
sex:strain 6 0.0206 0.0034 0.6788 0.6671
Residuals 96 0.4848 0.0051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 7.4053 0.04467   9 0.01489 0.006 7.317, 7.466 1.21
129S1/SvImJ m 7.3866 0.04335   8 0.01533 0.0059 7.338, 7.484 1.16
A/J f 7.4131 0.03491   9 0.01164 0.0047 7.342, 7.457 1.45
A/J m 7.347 0.08671   5 0.03878 0.0118 7.202, 7.436 0.26
C57BL/6J f 7.3849 0.04272   8 0.0151 0.0058 7.295, 7.421 0.56
C57BL/6J m 7.3479 0.037   8 0.01308 0.005 7.295, 7.398 0.28
CAST/EiJ f 7.3545 0.00636396   2   0.0045 0.0009 7.35, 7.359 -0.4
CAST/EiJ m 7.342 0.0   1   0.0 0.0 7.342, 7.342 0.15
NOD/ShiLtJ f 7.3302 0.05077   9 0.01692 0.0069 7.267, 7.41 -1.17
NOD/ShiLtJ m 7.2655 0.07736   8 0.02735 0.0106 7.152, 7.368 -1.6
NZO/HlLtJ f 7.3666 0.07334   8 0.02593 0.01 7.26, 7.462 -0.02
NZO/HlLtJ m 7.3734 0.13011   8 0.046 0.0176 7.083, 7.468 0.86
PWK/PhJ f 7.3531 0.01961   7 0.00741115 0.0027 7.316, 7.37 -0.45
PWK/PhJ m 7.35 0.02901   7 0.01096 0.0039 7.305, 7.381 0.33
WSB/EiJ f 7.3301 0.06795   8 0.02402 0.0093 7.236, 7.443 -1.18
WSB/EiJ m 7.2724 0.13896   8 0.04913 0.0191 7.074, 7.45 -1.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 7.3531428571 0.0268600159 7.4064595674 7.2998261469
129S1/SvImJ 2 7.35 0.0268600159 7.4033167102 7.2966832898
A/J 1 7.4053333333 0.0236883075 7.452354252 7.3583124147
A/J 2 7.386625 0.0251252443 7.4364982157 7.3367517843
BALB/cJ 1 7.4131111111 0.0236883075 7.4601320298 7.3660901924
BALB/cJ 2 7.347 0.0317811995 7.4100851823 7.2839148177
BTBR T+ Itpr3tf/J 1 7.366625 0.0251252443 7.4164982157 7.3167517843
BTBR T+ Itpr3tf/J 2 7.373375 0.0251252443 7.4232482157 7.3235017843
C3H/HeJ 1 7.330125 0.0251252443 7.3799982157 7.2802517843
C3H/HeJ 2 7.272375 0.0251252443 7.3222482157 7.2225017843
C57BL/6J 1 7.384875 0.0251252443 7.4347482157 7.3350017843
C57BL/6J 2 7.347875 0.0251252443 7.3977482157 7.2980017843
CAST/EiJ 1 7.3302222222 0.0236883075 7.3772431409 7.2832013035
CAST/EiJ 2 7.2655 0.0251252443 7.3153732157 7.2156267843


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.3515714286 0.0189928994 7.3892720359 7.3138708212
A/J both 7.3959791667 0.0172656727 7.430251256 7.3617070773
BALB/cJ both 7.3800555556 0.0198190599 7.4193960786 7.3407150325
BTBR T+ Itpr3tf/J both 7.37 0.0177662306 7.405265689 7.334734311
C3H/HeJ both 7.30125 0.0177662306 7.336515689 7.265984311
C57BL/6J both 7.366375 0.0177662306 7.401640689 7.331109311
CAST/EiJ both 7.2978611111 0.0172656727 7.3321332005 7.2635890218




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA