Project measure / variable:   Project1202   CFM.Total_14_5XFAD_HFD

ID, description, units MPD:130559   CFM.Total_14_5XFAD_HFD   CFM.Total    14 5XFAD HFD  
Data set, strains Project1202   F1 AD-BXD   41 strains     sex: both
Procedure None
Ontology mappings


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  STRAIN COMPARISON PLOT
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Project1202 - CFM.Total 14 5XFAD HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains38 strains
Mean of the strain means34.727   None 47.787   None
Median of the strain means32.382   None 49.18   None
SD of the strain means± 14.891 ± 15.151
Coefficient of variation (CV)0.4288 0.3171
Min–max range of strain means0.36   –   65.84   None 20.758   –   82.85   None
Mean sample size per strain5.4   mice 5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15611.87 15611.87 55.9306 < 0.0001
strain 34 59716.0673 1756.3549 6.2923 < 0.0001
sex:strain 34 17264.2545 507.7722 1.8191 0.0044
Residuals 342 95462.1608 279.1291


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 31.912 17.212   5 7.6976 0.5394 14.8, 60.4 -0.19
(B6.5XFAD x BXD113)F1 f 39.948 5.3115   6 2.1684 0.133 33.11, 47.2 0.35
(B6.5XFAD x BXD113)F1 m 42.737 18.517   6 7.5594 0.4333 26.35, 69.24 -0.33
(B6.5XFAD x BXD124)F1 f 65.84 19.666   6 8.0285 0.2987 36.18, 88.13 2.09
(B6.5XFAD x BXD124)F1 m 67.27 12.855   2   9.09 0.1911 58.18, 76.36 1.29
(B6.5XFAD x BXD125)F1 f 49.704 16.935   8 5.9874 0.3407 24.13, 74.53 1.01
(B6.5XFAD x BXD125)F1 m 38.304 16.436   7 6.2123 0.4291 15.64, 56.22 -0.63
(B6.5XFAD x BXD12)F1 f 3.086 1.7147   5 0.76682 0.5556 0.49, 4.98 -2.12
(B6.5XFAD x BXD12)F1 m 36.247 9.7547   7 3.6869 0.2691 23.51, 53.38 -0.76
(B6.5XFAD x BXD14)F1-ADtg f 58.6 6.1523   5 2.7514 0.105 50.89, 66.22 1.6
(B6.5XFAD x BXD14)F1-ADtg m 59.41 21.297   9 7.0991 0.3585 25.91, 87.82 0.77
(B6.5XFAD x BXD152)F1 f 50.54 30.064   9 10.021 0.5948 1.73, 79.82 1.06
(B6.5XFAD x BXD152)F1 m 82.85 10.174   5 4.5498 0.1228 72.8, 94.71 2.31
(B6.5XFAD x BXD154)F1 f 45.274 19.137   8 6.766 0.4227 18.49, 79.56 0.71
(B6.5XFAD x BXD154)F1 m 74.35 10.345   10 3.2713 0.1391 54.44, 84.36 1.75
(B6.5XFAD x BXD161)F1 f 32.303 12.737   6 5.2 0.3943 17.73, 50.18 -0.16
(B6.5XFAD x BXD161)F1 m 48.988 10.157   4 5.0786 0.2073 34.18, 57.24 0.08
(B6.5XFAD x BXD169)F1 f 34.485 26.954   6 11.004 0.7816 0.71, 66.52 -0.02
(B6.5XFAD x BXD169)F1 m 63.54 14.125   5 6.3167 0.2223 45.42, 76.31 1.04
(B6.5XFAD x BXD16)F1-ADtg f 55.16 20.53   6 8.3815 0.3722 17.02, 70.89 1.37
(B6.5XFAD x BXD16)F1-ADtg m 66.53 8.9827   4 4.4913 0.135 57.87, 78.98 1.24
(B6.5XFAD x BXD19)F1 f 30.305 13.058   6 5.3309 0.4309 11.47, 50.71 -0.3
(B6.5XFAD x BXD19)F1 m 40.858 8.2736   5 3.7001 0.2025 30.09, 50.18 -0.46
(B6.5XFAD x BXD28)F1 f 30.34 15.886   8 5.6167 0.5236 1.87, 50.76 -0.29
(B6.5XFAD x BXD28)F1 m 37.633 8.1984   4 4.0992 0.2179 26.53, 45.56 -0.67
(B6.5XFAD x BXD31)F1 f 13.69 0.0   1   0.0 0.0 13.69, 13.69 -1.41
(B6.5XFAD x BXD31)F1 m 56.92 29.903   5 13.373 0.5254 6.98, 80.27 0.6
(B6.5XFAD x BXD32)F1-ADtg f 26.188 16.871   4 8.4353 0.6442 1.29, 38.31 -0.57
(B6.5XFAD x BXD32)F1-ADtg m 29.334 20.103   5 8.9904 0.6853 8.8, 55.96 -1.22
(B6.5XFAD x BXD34)F1-ADtg f 28.472 17.417   5 7.7891 0.6117 0.98, 45.16 -0.42
(B6.5XFAD x BXD34)F1-ADtg m 53.01 17.08   5 7.6386 0.3222 34.67, 81.02 0.34
(B6.5XFAD x BXD38)F1 f 39.248 14.821   5 6.6281 0.3776 24.58, 59.07 0.3
(B6.5XFAD x BXD38)F1 m 60.66 15.478   6 6.3187 0.2552 44.31, 86.76 0.85
(B6.5XFAD x BXD39)F1 f 24.044 21.172   5 9.4686 0.8806 1.91, 51.56 -0.72
(B6.5XFAD x BXD39)F1 m 63.68 15.628   5 6.9893 0.2454 46.89, 83.07 1.05
(B6.5XFAD x BXD42)F1-ADtg f 28.547 16.935   3 9.7774 0.5932 11.38, 45.24 -0.42
(B6.5XFAD x BXD42)F1-ADtg m 41.413 26.475   4 13.238 0.6393 6.98, 65.29 -0.42
(B6.5XFAD x BXD48a)F1 f 56.64 18.448   2   13.045 0.3257 43.6, 69.69 1.47
(B6.5XFAD x BXD48a)F1 m 54.33 22.522   5 10.072 0.4145 16.49, 71.07 0.43
(B6.5XFAD x BXD49)F1 f 55.69 0.0   1   0.0 0.0 55.69, 55.69 1.41
(B6.5XFAD x BXD49)F1 m 62.67 18.192   5 8.1358 0.2903 33.64, 75.78 0.98
(B6.5XFAD x BXD50)F1 f 32.15 18.678   6 7.6253 0.581 11.96, 63.69 -0.17
(B6.5XFAD x BXD50)F1 m 52.78 11.882   7 4.4911 0.2251 41.2, 76.35 0.33
(B6.5XFAD x BXD55)F1-ADtg f 18.357 21.786   6 8.8943 1.1868 2.76, 52.89 -1.1
(B6.5XFAD x BXD55)F1-ADtg m 24.208 17.769   6 7.254 0.734 6.49, 58.13 -1.56
(B6.5XFAD x BXD60)F1-ADtg f 38.798 15.113   6 6.1697 0.3895 19.73, 57.02 0.27
(B6.5XFAD x BXD60)F1-ADtg m 46.927 14.193   7 5.3643 0.3024 27.16, 67.16 -0.06
(B6.5XFAD x BXD61)F1-ADtg f 30.097 17.704   6 7.2274 0.5882 0.8, 46.89 -0.31
(B6.5XFAD x BXD61)F1-ADtg m 50.27 24.256   7 9.168 0.4826 13.11, 85.02 0.16
(B6.5XFAD x BXD62)F1-ADtg f 23.518 24.478   6 9.993 1.0408 -0.75
(B6.5XFAD x BXD62)F1-ADtg m 49.372 19.445   6 7.9382 0.3938 26.8, 79.2 0.1
(B6.5XFAD x BXD65)F1-ADtg f 34.786 16.951   7 6.4069 0.4873 7.02, 56.84 0.0
(B6.5XFAD x BXD65)F1-ADtg m 62.79 10.213   9 3.4043 0.1627 45.02, 79.6 0.99
(B6.5XFAD x BXD66)F1-ADtg f 23.964 14.252   7 5.3868 0.5947 4.27, 50.76 -0.72
(B6.5XFAD x BXD66)F1-ADtg m 29.01 7.7512   4 3.8756 0.2672 22.04, 39.69 -1.24
(B6.5XFAD x BXD68)F1-ADtg f 28.205 17.233   8 6.0927 0.611 0.31, 50.89 -0.44
(B6.5XFAD x BXD68)F1-ADtg m 45.51 14.435   11 4.3524 0.3172 26.76, 71.64 -0.15
(B6.5XFAD x BXD73)F1 f 40.838 15.864   6 6.4764 0.3885 26.58, 63.07 0.41
(B6.5XFAD x BXD73)F1 m 45.8 10.241   7 3.8708 0.2236 33.33, 66.22 -0.13
(B6.5XFAD x BXD74)F1 f 48.336 12.241   5 5.4744 0.2532 34.49, 62.58 0.91
(B6.5XFAD x BXD74)F1 m 53.18 16.838   6 6.8742 0.3166 23.47, 68.47 0.36
(B6.5XFAD x BXD75)F1-ADtg f 6.4733 6.5268   6 2.6645 1.0083 0.18, 15.33 -1.9
(B6.5XFAD x BXD75)F1-ADtg m 20.758 13.028   5 5.8265 0.6276 11.87, 42.89 -1.78
(B6.5XFAD x BXD77)F1-ADtg f 39.177 14.757   6 6.0243 0.3767 23.24, 60.4 0.3
(B6.5XFAD x BXD77)F1-ADtg m 32.43 13.557   6 5.5348 0.4181 12.76, 47.96 -1.01
(B6.5XFAD x BXD78)F1 f 44.95 8.2926   3 4.7877 0.1845 38.71, 54.36 0.69
(B6.5XFAD x BXD83)F1 f 36.697 9.9359   6 4.0563 0.2708 25.87, 51.07 0.13
(B6.5XFAD x BXD83)F1 m 23.353 6.2033   3 3.5815 0.2656 18.31, 30.28 -1.61
(B6.5XFAD x BXD87)F1-ADtg f 32.382 22.858   5 10.222 0.7059 -0.16
(B6.5XFAD x BXD87)F1-ADtg m 52.11 18.001   5 8.0504 0.3455 39.73, 83.11 0.29
(B6.5XFAD x BXD89)F1-ADtg f 17.56 0.0   1   0.0 0.0 17.56, 17.56 -1.15
(B6.5XFAD x BXD99)F1-ADtg f 44.513 13.194   6 5.3865 0.2964 24.84, 56.2 0.66
(B6.5XFAD x BXD99)F1-ADtg m 43.04 21.195   5 9.4787 0.4924 18.8, 68.22 -0.31
(B6.5XFAD x D2)F1-ADtg f 0.36 0.0   1   0.0 0.0 0.36, 0.36 -2.31
(B6.5XFAD x D2)F1-ADtg m 23.065 15.337   2   10.845 0.665 12.22, 33.91 -1.63
(B6 x DBA/2J-Gpnmb+/SjJ)F1 f 31.562 21.04   4 10.52 0.6666 13.47, 56.07 -0.21
(B6 x DBA/2J-Gpnmb+/SjJ)F1 m 27.353 11.897   3 6.8686 0.4349 18.09, 40.77 -1.35
C57BL/6J f 51.08 18.234   12 5.2638 0.357 7.47, 72.71 1.1
C57BL/6J m 53.21 13.509   6 5.515 0.2539 34.89, 70.44 0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 26.1875 8.3535789487 42.6183603121 9.7566396879
129S1/SvImJ 2 29.334 7.4716681538 44.0302082347 14.6377917653
A/J 1 28.472 7.4716681538 43.1682082347 13.7757917653
A/J 2 53.014 7.4716681538 67.7102082347 38.3177917653
AKR/J 1 32.382 7.4716681538 47.0782082347 17.6857917653
AKR/J 2 52.106 7.4716681538 66.8022082347 37.4097917653
ALR/LtJ 1 49.70375 5.9068723218 61.3221227474 38.0853772526
ALR/LtJ 2 38.3042857143 6.3147121301 50.7248486322 25.8837227964
ALS/LtJ 1 32.15 6.8206686501 45.5657412665 18.7342587335
ALS/LtJ 2 52.7814285714 6.3147121301 65.2019914893 40.3608656535
BALB/cJ 1 28.5466666667 9.6458821094 47.5193899151 9.5739434183
BALB/cJ 2 41.4125 8.3535789487 57.8433603121 24.9816396879
BPH/2J 1 50.5422222222 5.5690526324 61.496129097 39.5883153475
BPH/2J 2 82.854 7.4716681538 97.5502082347 68.1577917653
BPL/1J 1 31.5625 8.3535789487 47.9933603121 15.1316396879
BPL/1J 2 27.3533333333 9.6458821094 46.3260565817 8.3806100849
BPN/3J 1 30.305 6.8206686501 43.7207412665 16.8892587335
BPN/3J 2 40.858 7.4716681538 55.5542082347 26.1617917653
BTBR T+ Itpr3tf/J 1 58.604 7.4716681538 73.3002082347 43.9077917653
BTBR T+ Itpr3tf/J 2 59.4122222222 5.5690526324 70.366129097 48.4583153475
BUB/BnJ 1 45.27375 5.9068723218 56.8921227474 33.6553772526
BUB/BnJ 2 74.354 5.2832672184 84.7457885005 63.9622114995
C3H/HeJ 1 18.3566666667 6.8206686501 31.7724079332 4.9409254001
C3H/HeJ 2 24.2083333333 6.8206686501 37.6240745999 10.7925920668
C57BL/6J 1 38.7983333333 6.8206686501 52.2140745999 25.3825920668
C57BL/6J 2 46.9271428571 6.3147121301 59.347705775 34.5065799392
C57BLKS/J 1 51.0791666667 4.8229410547 60.5655282909 41.5928050425
C57BLKS/J 2 53.205 6.8206686501 66.6207412665 39.7892587335
C57BR/cdJ 1 40.8383333333 6.8206686501 54.2540745999 27.4225920668
C57BR/cdJ 2 45.8 6.3147121301 58.2205629179 33.3794370821
C58/J 1 30.34 5.9068723218 41.9583727474 18.7216272526
C58/J 2 37.6325 8.3535789487 54.0633603121 21.2016396879
CAST/EiJ 1 55.1616666667 6.8206686501 68.5774079332 41.7459254001
CAST/EiJ 2 66.535 8.3535789487 82.9658603121 50.1041396879
CBA/J 1 44.5133333333 6.8206686501 57.9290745999 31.0975920668
CBA/J 2 43.04 7.4716681538 57.7362082347 28.3437917653
CE/J 1 32.3033333333 6.8206686501 45.7190745999 18.8875920668
CE/J 2 48.9875 8.3535789487 65.4183603121 32.5566396879
DBA/2J 1 30.0966666667 6.8206686501 43.5124079332 16.6809254001
DBA/2J 2 50.2657142857 6.3147121301 62.6862772036 37.8451513678
FVB/NJ 1 23.5183333333 6.8206686501 36.9340745999 10.1025920668
FVB/NJ 2 49.3716666667 6.8206686501 62.7874079332 35.9559254001
I/LnJ 1 24.044 7.4716681538 38.7402082347 9.3477917653
I/LnJ 2 63.68 7.4716681538 78.3762082347 48.9837917653
KK/HlJ 1 3.086 7.4716681538 17.7822082347 -11.6102082347
KK/HlJ 2 36.2471428571 6.3147121301 48.667705775 23.8265799392
LP/J 1 34.7857142857 6.3147121301 47.2062772036 22.3651513678
LP/J 2 62.7855555556 5.5690526324 73.7394624303 51.8316486808
MA/MyJ 1 65.8433333333 6.8206686501 79.2590745999 52.4275920668
MA/MyJ 2 67.27 11.8137446436 90.5067454948 44.0332545052
NOD/ShiLtJ 1 6.4733333333 6.8206686501 19.8890745999 -6.9424079332
NOD/ShiLtJ 2 20.758 7.4716681538 35.4542082347 6.0617917653
NON/ShiLtJ 1 36.6966666667 6.8206686501 50.1124079332 23.2809254001
NON/ShiLtJ 2 23.3533333333 9.6458821094 42.3260565817 4.3806100849
NZB/BlNJ 1 23.9642857143 6.3147121301 36.3848486322 11.5437227964
NZB/BlNJ 2 29.01 8.3535789487 45.4408603121 12.5791396879
PL/J 1 39.1766666667 6.8206686501 52.5924079332 25.7609254001
PL/J 2 32.43 6.8206686501 45.8457412665 19.0142587335
RBF/DnJ 1 48.336 7.4716681538 63.0322082347 33.6397917653
RBF/DnJ 2 53.1833333333 6.8206686501 66.5990745999 39.7675920668
RIIIS/J 1 34.485 6.8206686501 47.9007412665 21.0692587335
RIIIS/J 2 63.536 7.4716681538 78.2322082347 48.8397917653
SEA/GnJ 1 39.248 7.4716681538 53.9442082347 24.5517917653
SEA/GnJ 2 60.6583333333 6.8206686501 74.0740745999 47.2425920668
SJL/J 1 39.9483333333 6.8206686501 53.3640745999 26.5325920668
SJL/J 2 42.7366666667 6.8206686501 56.1524079332 29.3209254001
SM/J 1 56.645 11.8137446436 79.8817454948 33.4082545052
SM/J 2 54.33 7.4716681538 69.0262082347 39.6337917653
SWR/J 1 28.205 5.9068723218 39.8233727474 16.5866272526
SWR/J 2 45.51 5.0373976417 55.4181815705 35.6018184295


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 27.76075 5.6037511154 38.782906176 16.738593824
A/J both 40.743 5.2832672184 51.1347885005 30.3512114995
AKR/J both 42.244 5.2832672184 52.6357885005 31.8522114995
ALR/LtJ both 44.0040178571 4.3233878473 52.5077959659 35.5002397483
ALS/LtJ both 42.4657142857 4.6475022894 51.6070010787 33.3244274927
BALB/cJ both 34.9795833333 6.3801513093 47.5288601856 22.4303064811
BPH/2J both 66.6981111111 4.6594037232 75.8628071276 57.5334150946
BPL/1J both 29.4579166667 6.3801513093 42.0071935189 16.9086398144
BPN/3J both 35.5815 5.0583432524 45.5308800084 25.6321199916
BTBR T+ Itpr3tf/J both 59.0081111111 4.6594037232 68.1728071276 49.8434150946
BUB/BnJ both 59.813875 3.9624504138 67.6077163753 52.0200336247
C3H/HeJ both 21.2825 4.8229410547 30.7688616242 11.7961383758
C57BL/6J both 42.8627380952 4.6475022894 52.0040248882 33.7214513022
C57BLKS/J both 52.1420833333 4.1767894743 60.3575134894 43.9266531773
C57BR/cdJ both 43.3191666667 4.6475022894 52.4604534597 34.1778798737
C58/J both 33.98625 5.1155014876 44.0480559499 23.9244440501
CAST/EiJ both 60.8483333333 5.3922120249 71.4544080588 50.2422586079
CBA/J both 43.7766666667 5.0583432524 53.7260466751 33.8272866583
CE/J both 40.6454166667 5.3922120249 51.2514913921 30.0393419412
DBA/2J both 40.1811904762 4.6475022894 49.3224772692 31.0399036832
FVB/NJ both 36.445 4.8229410547 45.9313616242 26.9586383758
I/LnJ both 43.862 5.2832672184 54.2537885005 33.4702114995
KK/HlJ both 19.6665714286 4.8913549832 29.2874980949 10.0456447623
LP/J both 48.7856349206 4.2098080868 57.0660101992 40.505259642
MA/MyJ both 66.5566666667 6.8206686501 79.9724079332 53.1409254001
NOD/ShiLtJ both 13.6156666667 5.0583432524 23.5650466751 3.6662866583
NON/ShiLtJ both 30.025 5.9068723218 41.6433727474 18.4066272526
NZB/BlNJ both 26.4871428571 5.2358826987 36.7857295781 16.1885561362
PL/J both 35.8033333333 4.8229410547 45.2896949575 26.3169717091
RBF/DnJ both 50.7596666667 5.0583432524 60.7090466751 40.8102866583
RIIIS/J both 49.0105 5.0583432524 58.9598800084 39.0611199916
SEA/GnJ both 49.9531666667 5.0583432524 59.9025466751 40.0037866583
SJL/J both 41.3425 4.8229410547 50.8288616242 31.8561383758
SM/J both 55.4875 6.9891055848 69.2345440247 41.7404559753
SWR/J both 36.8575 3.8815755701 44.4922666522 29.2227333478




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA