Project measure / variable:   Project1202   CFM.Bin2_14_Ntg_Chow

ID, description, units MPD:130490   CFM.Bin2_14_Ntg_Chow   CFM.Bin2    14 Ntg Chow  
Data set, strains Project1202   F1 AD-BXD   50 strains     sex: both
Procedure None
Ontology mappings


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  STRAIN COMPARISON PLOT
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Project1202 - CFM.Bin2 14 Ntg Chow



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested49 strains42 strains
Mean of the strain means50.68   None 45.109   None
Median of the strain means53.55   None 43.564   None
SD of the strain means± 14.797 ± 17.015
Coefficient of variation (CV)0.292 0.3772
Min–max range of strain means0.0   –   80.18   None 0.0   –   81.53   None
Mean sample size per strain6.8   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3279.7723 3279.7723 7.4581 0.0066
strain 38 95628.756 2516.5462 5.7226 < 0.0001
sex:strain 38 21955.3399 577.7721 1.3138 0.1052
Residuals 451 198331.1062 439.7586


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 33.58 13.59   9 4.5299 0.4047 19.51, 62.53 -1.16
(B6.5XFAD x BXD100)F1-ADtg m 27.27 4.2319   3 2.4433 0.1552 22.39, 29.93 -1.05
(B6.5XFAD x BXD101)F1 f 53.66 9.0934   2   6.43 0.1695 47.23, 60.09 0.2
(B6.5XFAD x BXD 102)F1 f 44.57 34.804   2   24.61 0.7809 19.96, 69.18 -0.41
(B6.5XFAD x BXD113)F1 f 56.76 16.748   8 5.9213 0.2951 28.6, 82.71 0.41
(B6.5XFAD x BXD113)F1 m 52.29 5.0011   6 2.0417 0.0956 46.56, 59.87 0.42
(B6.5XFAD x BXD124)F1 f 74.83 18.056   10 5.7099 0.2413 45.9, 97.34 1.63
(B6.5XFAD x BXD124)F1 m 57.01 26.184   7 9.8966 0.4593 11.97, 92.02 0.7
(B6.5XFAD x BXD125)F1 f 59.3 25.665   7 9.7004 0.4328 22.39, 95.79 0.58
(B6.5XFAD x BXD125)F1 m 41.39 33.068   5 14.789 0.7989 5.99, 79.72 -0.22
(B6.5XFAD x BXD12)F1 f 43.959 23.183   8 8.1963 0.5274 19.29, 94.24 -0.45
(B6.5XFAD x BXD12)F1 m 44.975 36.669   8 12.964 0.8153 4.88, 92.68 -0.01
(B6.5XFAD x BXD14)F1-ADtg f 60.16 12.291   3 7.0964 0.2043 46.78, 70.95 0.64
(B6.5XFAD x BXD14)F1-ADtg m 60.53 16.74   6 6.8339 0.2765 42.57, 85.37 0.91
(B6.5XFAD x BXD152)F1 f 65.81 28.273   10 8.9406 0.4296 4.43, 97.78 1.02
(B6.5XFAD x BXD152)F1 m 71.57 18.753   5 8.3864 0.262 41.91, 92.9 1.56
(B6.5XFAD x BXD154)F1 f 75.93 15.153   7 5.7273 0.1996 51.22, 94.68 1.71
(B6.5XFAD x BXD154)F1 m 63.12 25.334   6 10.343 0.4014 34.15, 98.23 1.06
(B6.5XFAD x BXD161)F1 f 30.411 11.65   7 4.4033 0.3831 12.2, 47.01 -1.37
(B6.5XFAD x BXD161)F1 m 32.372 20.223   6 8.256 0.6247 7.54, 57.65 -0.75
(B6.5XFAD x BXD169)F1 f 73.14 13.289   7 5.0228 0.1817 52.55, 90.24 1.52
(B6.5XFAD x BXD169)F1 m 36.008 24.033   5 10.748 0.6674 5.76, 62.97 -0.53
(B6.5XFAD x BXD16)F1-ADtg f 61.86 22.114   12 6.3838 0.3575 12.2, 94.9 0.76
(B6.5XFAD x BXD16)F1-ADtg m 60.68 21.156   6 8.6368 0.3487 22.17, 78.27 0.92
(B6.5XFAD x BXD19)F1 f 54.35 22.837   7 8.6315 0.4201 24.39, 81.37 0.25
(B6.5XFAD x BXD19)F1 m 47.19 27.462   7 10.38 0.582 5.32, 79.33 0.12
(B6.5XFAD x BXD22)F1-ADtg f 32.817 8.1416   3 4.7006 0.2481 27.05, 42.13 -1.21
(B6.5XFAD x BXD28)F1 f 56.1 17.563   5 7.8545 0.3131 31.71, 75.61 0.37
(B6.5XFAD x BXD28)F1 m 56.28 28.86   5 12.906 0.5128 13.75, 81.6 0.66
(B6.5XFAD x BXD31)F1 f 55.61 14.141   10 4.4717 0.2543 27.94, 74.5 0.33
(B6.5XFAD x BXD31)F1 m 74.77 10.227   5 4.5739 0.1368 61.42, 88.47 1.74
(B6.5XFAD x BXD32)F1-ADtg f 54.66 11.818   4 5.909 0.2162 37.25, 62.75 0.27
(B6.5XFAD x BXD32)F1-ADtg m 70.22 23.705   6 9.6776 0.3376 25.06, 93.13 1.48
(B6.5XFAD x BXD33)F1 f 63.5 24.376   5 10.901 0.3838 36.59, 98.67 0.87
(B6.5XFAD x BXD34)F1-ADtg f 61.99 29.132   7 11.011 0.47 11.75, 94.46 0.76
(B6.5XFAD x BXD34)F1-ADtg m 48.514 19.411   5 8.6808 0.4001 29.05, 76.94 0.2
(B6.5XFAD x BXD38)F1 f 53.73 24.387   6 9.956 0.4539 17.29, 88.69 0.21
(B6.5XFAD x BXD38)F1 m 42.54 25.176   7 9.5156 0.5918 20.84, 88.91 -0.15
(B6.5XFAD x BXD39)F1 f 67.25 19.767   7 7.4714 0.294 46.78, 90.47 1.12
(B6.5XFAD x BXD39)F1 m 81.53 14.604   7 5.5198 0.1791 59.2, 99.78 2.14
(B6.5XFAD x BXD42)F1-ADtg f 28.953 18.9   7 7.1436 0.6528 6.21, 54.77 -1.47
(B6.5XFAD x BXD42)F1-ADtg m 18.58 11.15   5 4.9863 0.6001 2.88, 33.92 -1.56
(B6.5XFAD x BXD48a)F1 f 51.47 17.358   7 6.5608 0.3372 24.39, 68.74 0.05
(B6.5XFAD x BXD48a)F1 m 39.802 17.862   6 7.2923 0.4488 19.07, 66.74 -0.31
(B6.5XFAD x BXD49)F1 f 69.18 25.561   5 11.431 0.3695 24.39, 88.25 1.25
(B6.5XFAD x BXD49)F1 m 31.93 37.943   2   26.83 1.1883 5.1, 58.76 -0.77
(B6.5XFAD x BXD50)F1 f 53.13 29.005   5 12.972 0.5459 16.63, 89.14 0.17
(B6.5XFAD x BXD50)F1 m 44.834 23.997   5 10.732 0.5352 7.98, 68.29 -0.02
(B6.5XFAD x BXD51)F1-ADtg m 33.595 11.448   2   8.095 0.3408 25.5, 41.69 -0.68
(B6.5XFAD x BXD53)F1 f 53.55 29.156   4 14.578 0.5445 23.5, 89.36 0.19
(B6.5XFAD x BXD55)F1-ADtg f 36.23 25.597   5 11.447 0.7065 13.53, 74.5 -0.98
(B6.5XFAD x BXD55)F1-ADtg m 27.008 23.432   5 10.479 0.8676 7.1, 64.75 -1.06
(B6.5XFAD x BXD60)F1-ADtg f 46.507 21.069   4 10.535 0.453 17.52, 65.63 -0.28
(B6.5XFAD x BXD60)F1-ADtg m 43.999 16.637   7 6.2882 0.3781 31.49, 79.6 -0.07
(B6.5XFAD x BXD61)F1-ADtg f 31.727 7.7501   4 3.8751 0.2443 22.39, 38.89 -1.28
(B6.5XFAD x BXD61)F1-ADtg m 43.128 15.001   6 6.1241 0.3478 28.38, 64.97 -0.12
(B6.5XFAD x BXD62)F1-ADtg f 80.18 16.034   10 5.0705 0.2 40.13, 94.24 1.99
(B6.5XFAD x BXD62)F1-ADtg m 52.99 17.442   5 7.8003 0.3291 27.27, 75.39 0.46
(B6.5XFAD x BXD64)F1 f 42.903 18.494   4 9.2469 0.4311 17.29, 57.43 -0.53
(B6.5XFAD x BXD65a)F1 f 67.52 17.984   6 7.3421 0.2664 47.23, 88.91 1.14
(B6.5XFAD x BXD65)F1-ADtg f 44.79 12.256   5 5.4809 0.2736 26.83, 57.87 -0.4
(B6.5XFAD x BXD65)F1-ADtg m 49.89 11.472   3 6.6235 0.23 37.47, 60.09 0.28
(B6.5XFAD x BXD66)F1-ADtg f 43.154 23.201   8 8.2029 0.5376 12.86, 69.62 -0.51
(B6.5XFAD x BXD66)F1-ADtg m 34.236 10.535   5 4.7116 0.3077 25.28, 50.11 -0.64
(B6.5XFAD x BXD68)F1-ADtg f 41.685 24.016   8 8.4908 0.5761 3.55, 77.38 -0.61
(B6.5XFAD x BXD68)F1-ADtg m 53.14 32.282   6 13.179 0.6075 6.21, 78.94 0.47
(B6.5XFAD x BXD73)F1 f 50.0 28.748   6 11.736 0.5749 7.1, 82.26 -0.05
(B6.5XFAD x BXD73)F1 m 40.407 28.442   4 14.221 0.7039 17.29, 80.49 -0.28
(B6.5XFAD x BXD74)F1 f 55.94 19.914   10 6.2972 0.356 13.3, 81.37 0.36
(B6.5XFAD x BXD74)F1 m 67.71 19.007   8 6.7201 0.2807 38.8, 87.58 1.33
(B6.5XFAD x BXD75)F1-ADtg f 34.703 20.74   4 10.37 0.5977 19.07, 64.75 -1.08
(B6.5XFAD x BXD75)F1-ADtg m 15.254 12.848   5 5.7456 0.8422 2.22, 35.92 -1.75
(B6.5XFAD x BXD77)F1-ADtg f 37.026 15.857   5 7.0916 0.4283 15.96, 60.31 -0.92
(B6.5XFAD x BXD77)F1-ADtg m 30.064 20.583   5 9.2052 0.6847 8.2, 53.66 -0.88
(B6.5XFAD x BXD78)F1 f 37.067 10.653   6 4.3489 0.2874 25.94, 56.1 -0.92
(B6.5XFAD x BXD78)F1 m 41.02 0.0   1   0.0 0.0 41.02, 41.02 -0.24
(B6.5XFAD x BXD83)F1 f 36.341 16.308   10 5.1571 0.4488 14.63, 66.3 -0.97
(B6.5XFAD x BXD83)F1 m 40.762 14.975   6 6.1137 0.3674 22.62, 61.86 -0.26
(B6.5XFAD x BXD87)F1-ADtg f 55.61 24.586   10 7.7748 0.4421 5.1, 86.25 0.33
(B6.5XFAD x BXD87)F1-ADtg m 21.913 11.977   6 4.8898 0.5466 6.87, 34.37 -1.36
(B6.5XFAD x BXD98)F1 f 54.77 11.201   5 5.0091 0.2045 41.69, 66.52 0.28
(B6.5XFAD x BXD99)F1-ADtg f 52.97 21.606   11 6.5146 0.4079 27.27, 86.7 0.15
(B6.5XFAD x BXD99)F1-ADtg m 59.72 21.181   6 8.6469 0.3547 33.26, 88.25 0.86
(B6.5XFAD x D2)F1-ADtg f 48.47 21.105   5 9.4386 0.4354 13.53, 68.51 -0.15
(B6.5XFAD x D2)F1-ADtg m 35.92 0.0   1   0.0 0.0 35.92, 35.92 -0.54
(B6 x DBA/2J-Gpnmb+/SjJ)F1 f 38.872 27.243   16 6.8107 0.7008 8.65, 88.25 -0.8
(B6 x DBA/2J-Gpnmb+/SjJ)F1 m 36.728 15.126   20 3.3822 0.4118 10.42, 72.95 -0.49
C57BL/6J f 56.63 18.562   17 4.5019 0.3278 22.84, 89.58 0.4
C57BL/6J m 63.67 19.92   14 5.3238 0.3129 25.5, 97.12 1.09
DBA/2J f 0.0 0.0   2   0.0 None -3.43
DBA/2J m 0.0 0.0   2   0.0 None -2.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 61.8641666667 6.0536390591 73.7610076625 49.9673256709
129S1/SvImJ 2 60.6783333333 8.5611384591 77.503007219 43.8536594477
A/J 1 54.6575 10.4852104211 75.2634330543 34.0515669457
A/J 2 70.215 8.5611384591 87.0396738857 53.3903261143
AKR/J 1 37.026 9.3782573039 55.4565068197 18.5954931803
AKR/J 2 30.064 9.3782573039 48.4945068197 11.6334931803
ALR/LtJ 1 74.834 6.6314293353 87.8663363529 61.8016636471
ALR/LtJ 2 57.0057142857 7.9260740624 72.5823355412 41.4290930303
ALS/LtJ 1 59.2957142857 7.9260740624 74.8723355412 43.7190930303
ALS/LtJ 2 41.39 9.3782573039 59.8205068197 22.9594931803
BALB/cJ 1 61.9885714286 7.9260740624 77.565192684 46.4119501731
BALB/cJ 2 48.514 9.3782573039 66.9445068197 30.0834931803
BPH/2J 1 53.128 9.3782573039 71.5585068197 34.6974931803
BPH/2J 2 44.834 9.3782573039 63.2645068197 26.4034931803
BPL/1J 1 43.95875 7.4141633909 58.5293449954 29.3881550046
BPL/1J 2 44.975 7.4141633909 59.5455949954 30.4044050046
BPN/3J 1 73.1385714286 7.9260740624 88.715192684 57.5619501731
BPN/3J 2 36.008 9.3782573039 54.4385068197 17.5774931803
BTBR T+ Itpr3tf/J 1 33.58 6.9901402807 47.3172887029 19.8427112971
BTBR T+ Itpr3tf/J 2 27.27 12.1072781182 51.0636819916 3.4763180084
BUB/BnJ 1 65.808 6.6314293353 78.8403363529 52.7756636471
BUB/BnJ 2 71.574 9.3782573039 90.0045068197 53.1434931803
C3H/HeJ 1 28.9528571429 7.9260740624 44.5294783983 13.3762358874
C3H/HeJ 2 18.58 9.3782573039 37.0105068197 0.1494931803
C57BL/10J 1 56.6335294118 5.0860741262 66.6288751173 46.6381837062
C57BL/10J 2 63.6685714286 5.6045807177 74.6829059463 52.6542369109
C57BL/6J 1 36.23 9.3782573039 54.6605068197 17.7994931803
C57BL/6J 2 27.008 9.3782573039 45.4385068197 8.5774931803
C57BLKS/J 1 50.0016666667 8.5611384591 66.8263405523 33.176992781
C57BLKS/J 2 40.4075 10.4852104211 61.0134330543 19.8015669457
C57BR/cdJ 1 67.2457142857 7.9260740624 82.8223355412 51.6690930303
C57BR/cdJ 2 81.5328571429 7.9260740624 97.1094783983 65.9562358874
C57L/J 1 36.341 6.6314293353 49.3733363529 23.3086636471
C57L/J 2 40.7616666667 8.5611384591 57.5863405523 23.936992781
C58/J 1 54.3542857143 7.9260740624 69.9309069697 38.7776644588
C58/J 2 47.19 7.9260740624 62.7666212555 31.6133787445
CAST/EiJ 1 60.16 12.1072781182 83.9536819916 36.3663180084
CAST/EiJ 2 60.5316666667 8.5611384591 77.3563405523 43.706992781
CBA/J 1 55.609 6.6314293353 68.6413363529 42.5766636471
CBA/J 2 21.9133333333 8.5611384591 38.738007219 5.0886594477
CE/J 1 75.9271428571 7.9260740624 91.5037641126 60.3505216017
CE/J 2 63.12 8.5611384591 79.9446738857 46.2953261143
DBA/2J 1 46.5075 10.4852104211 67.1134330543 25.9015669457
DBA/2J 2 43.9985714286 7.9260740624 59.575192684 28.4219501731
FVB/NJ 1 31.7275 10.4852104211 52.3334330543 11.1215669457
FVB/NJ 2 43.1283333333 8.5611384591 59.953007219 26.3036594477
I/LnJ 1 55.609 6.6314293353 68.6413363529 42.5766636471
I/LnJ 2 74.77 9.3782573039 93.2005068197 56.3394931803
KK/HlJ 1 56.7625 7.4141633909 71.3330949954 42.1919050046
KK/HlJ 2 52.29 8.5611384591 69.1146738857 35.4653261143
LP/J 1 80.18 6.6314293353 93.2123363529 67.1476636471
LP/J 2 52.994 9.3782573039 71.4245068197 34.5634931803
MA/MyJ 1 38.871875 5.2426052105 49.1748415271 28.5689084729
MA/MyJ 2 36.7285 4.689128652 45.9437534098 27.5132465902
NOD/ShiLtJ 1 41.685 7.4141633909 56.2555949954 27.1144050046
NOD/ShiLtJ 2 53.1416666667 8.5611384591 69.9663405523 36.316992781
NON/ShiLtJ 1 69.18 9.3782573039 87.6105068197 50.7494931803
NON/ShiLtJ 2 31.93 14.8283267818 61.0711899907 2.7888100093
NZB/BlNJ 1 44.79 9.3782573039 63.2205068197 26.3594931803
NZB/BlNJ 2 49.89 12.1072781182 73.6836819916 26.0963180084
NZW/LacJ 1 55.941 6.6314293353 68.9733363529 42.9086636471
NZW/LacJ 2 67.71125 7.4141633909 82.2818449954 53.1406550046
PL/J 1 34.7025 10.4852104211 55.3084330543 14.0965669457
PL/J 2 15.254 9.3782573039 33.6845068197 -3.1765068197
RBF/DnJ 1 51.4742857143 7.9260740624 67.0509069697 35.8976644588
RBF/DnJ 2 39.8016666667 8.5611384591 56.6263405523 22.976992781
RIIIS/J 1 30.4114285714 7.9260740624 45.9880498269 14.834807316
RIIIS/J 2 32.3716666667 8.5611384591 49.1963405523 15.546992781
SEA/GnJ 1 56.098 9.3782573039 74.5285068197 37.6674931803
SEA/GnJ 2 56.278 9.3782573039 74.7085068197 37.8474931803
SJL/J 1 52.9718181818 6.3228197845 65.3976633448 40.5459730189
SJL/J 2 59.72 8.5611384591 76.5446738857 42.8953261143
SM/J 1 53.7316666667 8.5611384591 70.5563405523 36.906992781
SM/J 2 42.54 7.9260740624 58.1166212555 26.9633787445
SPRET/EiJ 1 0.0 14.8283267818 29.1411899907 -29.1411899907
SPRET/EiJ 2 0.0 14.8283267818 29.1411899907 -29.1411899907
SWR/J 1 43.15375 7.4141633909 57.7243449954 28.5831550046
SWR/J 2 34.236 9.3782573039 52.6665068197 15.8054931803


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 61.27125 5.2426052105 71.5742165271 50.9682834729
A/J both 62.43625 6.7681742237 75.7373225921 49.1351774079
AKR/J both 33.545 6.6314293353 46.5773363529 20.5126636471
ALR/LtJ both 65.9198571429 5.1671681091 76.0745718182 55.7651424675
ALS/LtJ both 50.3428571429 6.1395105689 62.4084560854 38.2772582003
BALB/cJ both 55.2512857143 6.1395105689 67.3168846568 43.1856867718
BPH/2J both 48.981 6.6314293353 62.0133363529 35.9486636471
BPL/1J both 44.466875 5.2426052105 54.7698415271 34.1639084729
BPN/3J both 54.5732857143 6.1395105689 66.6388846568 42.5076867718
BTBR T+ Itpr3tf/J both 30.425 6.9901402807 44.1622887029 16.6877112971
BUB/BnJ both 68.691 5.7429862678 79.9773343523 57.4046656477
C3H/HeJ both 23.7664285714 6.1395105689 35.8320275139 11.7008296289
C57BL/10J both 60.1510504202 3.784160245 67.5878256057 52.7142752346
C57BL/6J both 31.619 6.6314293353 44.6513363529 18.5866636471
C57BLKS/J both 45.2045833333 6.7681742237 58.5056559254 31.9035107413
C57BR/cdJ both 74.3892857143 5.6045807177 85.403620232 63.3749511966
C57L/J both 38.5513333333 5.414539379 49.192191407 27.9104752597
C58/J both 50.7721428571 5.6045807177 61.7864773749 39.7578083394
CAST/EiJ both 60.3458333333 7.4141633909 74.9164283287 45.775238338
CBA/J both 38.7611666667 5.414539379 49.4020247403 28.120308593
CE/J both 69.5235714286 5.8334325606 80.9876542647 58.0594885924
DBA/2J both 45.2530357143 6.5719534314 58.1684877657 32.3375836628
FVB/NJ both 37.4279166667 6.7681742237 50.7289892587 24.1268440746
I/LnJ both 65.1895 5.7429862678 76.4758343523 53.9031656477
KK/HlJ both 54.52625 5.6626608256 65.6547257478 43.3977742522
LP/J both 66.587 5.7429862678 77.8733343523 55.3006656477
MA/MyJ both 37.8001875 3.516846489 44.7116275574 30.8887474426
NOD/ShiLtJ both 47.4133333333 5.6626608256 58.5418090811 36.2848575855
NON/ShiLtJ both 50.555 8.7725564291 67.795160496 33.314839504
NZB/BlNJ both 47.34 7.6573150237 62.388445803 32.291554197
NZW/LacJ both 61.826125 4.9735720015 71.6003772647 52.0518727353
PL/J both 24.97825 7.033692978 38.8011301148 11.1553698852
RBF/DnJ both 45.6379761905 5.8334325606 57.1020590266 34.1738933543
RIIIS/J both 31.391547619 5.8334325606 42.8556304552 19.9274647829
SEA/GnJ both 56.188 6.6314293353 69.2203363529 43.1556636471
SJL/J both 56.3459090909 5.3214458031 66.8038161398 45.888002042
SM/J both 48.1358333333 5.8334325606 59.5999161695 36.6717504972
SPRET/EiJ both 0.0 10.4852104211 20.6059330543 -20.6059330543
SWR/J both 38.694875 5.9774896245 50.4420642399 26.9476857601




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA