Project measure / variable:   Project1202   CFC.PS3_14_Ntg_HFD

ID, description, units MPD:130450   CFC.PS3_14_Ntg_HFD   CFC.PS3    14 Ntg HFD  
Data set, strains Project1202   F1 AD-BXD   41 strains     sex: both
Procedure None
Ontology mappings


  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Project1202 - CFC.PS3 14 Ntg HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains38 strains
Mean of the strain means51.21   None 54.45   None
Median of the strain means55.07   None 56.03   None
SD of the strain means± 13.926 ± 11.987
Coefficient of variation (CV)0.2719 0.2201
Min–max range of strain means10.0   –   77.5   None 32.733   –   75.6   None
Mean sample size per strain5.4   mice 5.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 208.5635 208.5635 0.483 0.4876
strain 37 36150.0044 977.0271 2.2625 < 0.0001
sex:strain 37 23456.8357 633.9685 1.4681 0.0433
Residuals 341 147256.0538 431.8359


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 56.27 28.724   5 12.846 0.5105 8.0, 84.67 0.36
(B6.5XFAD x BXD113)F1 f 63.33 19.784   4 9.8919 0.3124 34.0, 76.67 0.87
(B6.5XFAD x BXD113)F1 m 47.6 15.907   5 7.1139 0.3342 26.0, 70.0 -0.57
(B6.5XFAD x BXD124)F1 f 69.14 10.461   7 3.9538 0.1513 55.33, 82.0 1.29
(B6.5XFAD x BXD124)F1 m 61.75 29.562   6 12.068 0.4788 4.0, 86.67 0.61
(B6.5XFAD x BXD125)F1 f 55.78 22.309   6 9.1076 0.4 18.67, 80.67 0.33
(B6.5XFAD x BXD125)F1 m 54.66 30.367   5 13.581 0.5555 22.0, 89.33 0.02
(B6.5XFAD x BXD12)F1 f 59.44 25.163   4 12.582 0.4233 26.0, 86.43 0.59
(B6.5XFAD x BXD12)F1 m 63.22 21.221   6 8.6636 0.3357 32.0, 85.33 0.73
(B6.5XFAD x BXD14)F1-ADtg f 54.8 16.063   5 7.1834 0.2931 34.67, 79.33 0.26
(B6.5XFAD x BXD14)F1-ADtg m 64.44 16.569   10 5.2396 0.2571 33.33, 94.67 0.83
(B6.5XFAD x BXD152)F1 f 66.47 25.065   7 9.4738 0.3771 36.0, 100.0 1.1
(B6.5XFAD x BXD152)F1 m 55.89 27.633   6 11.281 0.4944 18.67, 82.0 0.12
(B6.5XFAD x BXD154)F1 f 57.62 26.285   7 9.9346 0.4562 9.33, 88.67 0.46
(B6.5XFAD x BXD154)F1 m 41.167 27.813   4 13.907 0.6756 12.67, 79.33 -1.11
(B6.5XFAD x BXD161)F1 f 67.33 3.8589   5 1.7258 0.0573 62.0, 71.33 1.16
(B6.5XFAD x BXD161)F1 m 58.67 33.593   5 15.023 0.5726 3.33, 88.0 0.35
(B6.5XFAD x BXD169)F1 f 32.777 15.474   6 6.3174 0.4721 2.67, 43.33 -1.32
(B6.5XFAD x BXD169)F1 m 65.56 14.259   6 5.8212 0.2175 38.0, 76.0 0.93
(B6.5XFAD x BXD16)F1-ADtg f 51.56 23.519   6 9.6015 0.4562 20.67, 88.0 0.02
(B6.5XFAD x BXD16)F1-ADtg m 74.17 14.861   4 7.4303 0.2004 54.67, 90.67 1.64
(B6.5XFAD x BXD19)F1 f 63.07 12.136   5 5.4275 0.1924 47.33, 80.0 0.85
(B6.5XFAD x BXD19)F1 m 43.62 19.885   7 7.5157 0.4559 11.33, 64.0 -0.9
(B6.5XFAD x BXD28)F1 f 60.34 22.857   6 9.3313 0.3788 22.67, 86.67 0.66
(B6.5XFAD x BXD28)F1 m 38.501 23.365   8 8.2609 0.6069 6.67, 78.67 -1.33
(B6.5XFAD x BXD31)F1 f 54.56 16.423   5 7.3447 0.301 34.67, 77.48 0.24
(B6.5XFAD x BXD31)F1 m 62.67 29.297   5 13.102 0.4675 14.67, 87.33 0.69
(B6.5XFAD x BXD32)F1-ADtg f 56.84 18.567   4 9.2834 0.3267 42.67, 82.67 0.4
(B6.5XFAD x BXD32)F1-ADtg m 56.17 25.827   4 12.914 0.4598 28.0, 80.67 0.14
(B6.5XFAD x BXD34)F1-ADtg f 60.44 30.263   3 17.473 0.5007 27.33, 86.67 0.66
(B6.5XFAD x BXD34)F1-ADtg m 68.89 11.492   3 6.6349 0.1668 58.67, 81.33 1.2
(B6.5XFAD x BXD38)F1 f 57.55 18.27   6 7.4587 0.3174 40.67, 87.33 0.46
(B6.5XFAD x BXD38)F1 m 48.805 7.6161   4 3.8081 0.1561 44.0, 60.0 -0.47
(B6.5XFAD x BXD39)F1 f 49.665 14.084   4 7.0421 0.2836 32.0, 64.0 -0.11
(B6.5XFAD x BXD39)F1 m 75.6 15.795   5 7.0638 0.2089 51.33, 91.33 1.76
(B6.5XFAD x BXD42)F1-ADtg f 25.416 30.211   8 10.681 1.1887 -1.85
(B6.5XFAD x BXD42)F1-ADtg m 32.733 14.182   4 7.091 0.4333 18.54, 46.67 -1.81
(B6.5XFAD x BXD48a)F1 f 37.335 6.5973   2   4.665 0.1767 32.67, 42.0 -1.0
(B6.5XFAD x BXD48a)F1 m 68.4 15.509   5 6.936 0.2267 44.67, 83.33 1.16
(B6.5XFAD x BXD49)F1 f 77.5 15.982   4 7.9911 0.2062 58.67, 97.33 1.89
(B6.5XFAD x BXD49)F1 m 52.0 31.673   3 18.287 0.6091 23.33, 86.0 -0.2
(B6.5XFAD x BXD50)F1 f 45.553 17.348   6 7.0825 0.3808 27.33, 72.0 -0.41
(B6.5XFAD x BXD50)F1 m 50.33 22.592   8 7.9876 0.4488 10.0, 76.67 -0.34
(B6.5XFAD x BXD55)F1-ADtg f 39.666 25.213   8 8.9141 0.6356 -0.83
(B6.5XFAD x BXD55)F1-ADtg m 34.477 17.263   7 6.5248 0.5007 12.67, 68.0 -1.67
(B6.5XFAD x BXD60)F1-ADtg f 47.665 7.6325   6 3.1159 0.1601 38.0, 56.0 -0.25
(B6.5XFAD x BXD60)F1-ADtg m 62.33 13.758   6 5.6167 0.2207 45.33, 79.33 0.66
(B6.5XFAD x BXD61)F1-ADtg f 61.9 9.0569   7 3.4232 0.1463 45.33, 72.67 0.77
(B6.5XFAD x BXD61)F1-ADtg m 74.0 7.9429   4 3.9714 0.1073 66.67, 84.0 1.63
(B6.5XFAD x BXD62)F1-ADtg f 52.77 23.799   7 8.9953 0.451 17.33, 92.0 0.11
(B6.5XFAD x BXD62)F1-ADtg m 57.71 11.956   7 4.5189 0.2072 45.33, 79.33 0.27
(B6.5XFAD x BXD65)F1-ADtg f 41.665 23.88   4 11.94 0.5731 13.33, 71.33 -0.69
(B6.5XFAD x BXD65)F1-ADtg m 62.27 7.4027   5 3.3106 0.1189 52.67, 72.67 0.65
(B6.5XFAD x BXD66)F1-ADtg f 55.07 29.137   5 13.031 0.5291 16.0, 88.0 0.28
(B6.5XFAD x BXD66)F1-ADtg m 52.27 10.248   5 4.5831 0.1961 40.0, 68.0 -0.18
(B6.5XFAD x BXD68)F1-ADtg f 54.57 23.257   7 8.7905 0.4262 8.67, 82.0 0.24
(B6.5XFAD x BXD68)F1-ADtg m 56.67 12.535   5 5.6059 0.2212 38.0, 70.67 0.18
(B6.5XFAD x BXD73)F1 f 37.261 18.425   9 6.1416 0.4945 10.67, 66.0 -1.0
(B6.5XFAD x BXD73)F1 m 33.333 29.588   6 12.079 0.8877 6.0, 85.33 -1.76
(B6.5XFAD x BXD74)F1 f 66.22 20.755   3 11.983 0.3134 46.67, 88.0 1.08
(B6.5XFAD x BXD74)F1 m 60.08 23.747   8 8.3958 0.3952 22.67, 83.33 0.47
(B6.5XFAD x BXD75)F1-ADtg f 35.168 20.776   4 10.388 0.5908 13.33, 56.67 -1.15
(B6.5XFAD x BXD75)F1-ADtg m 45.334 14.92   5 6.6724 0.3291 28.67, 63.33 -0.76
(B6.5XFAD x BXD77)F1-ADtg f 34.332 8.7876   4 4.3938 0.256 21.33, 40.67 -1.21
(B6.5XFAD x BXD77)F1-ADtg m 34.778 33.214   6 13.56 0.955 -1.64
(B6.5XFAD x BXD78)F1 f 27.11 7.8139   3 4.5113 0.2882 21.33, 36.0 -1.73
(B6.5XFAD x BXD78)F1 m 59.34 10.373   2   7.335 0.1748 52.0, 66.67 0.41
(B6.5XFAD x BXD83)F1 f 60.97 18.21   11 5.4905 0.2987 20.0, 86.0 0.7
(B6.5XFAD x BXD83)F1 m 46.934 13.766   5 6.1561 0.2933 34.67, 70.67 -0.63
(B6.5XFAD x BXD87)F1-ADtg f 60.0 31.18   5 13.944 0.5197 14.67, 94.0 0.63
(B6.5XFAD x BXD87)F1-ADtg m 47.667 30.67   6 12.521 0.6434 12.0, 78.0 -0.57
(B6.5XFAD x BXD89)F1-ADtg f 10.0 14.142   2   10.0 1.4142 -2.96
(B6.5XFAD x BXD99)F1-ADtg f 61.78 17.046   6 6.9591 0.2759 40.67, 92.0 0.76
(B6.5XFAD x BXD99)F1-ADtg m 48.168 15.216   4 7.6079 0.3159 26.0, 59.33 -0.52
(B6.5XFAD x D2)F1-ADtg f 38.665 26.396   2   18.665 0.6827 20.0, 57.33 -0.9
(B6 x DBA/2J-Gpnmb+/SjJ)F1 f 36.134 17.324   5 7.7474 0.4794 14.0, 54.0 -1.08
(B6 x DBA/2J-Gpnmb+/SjJ)F1 m 69.89 24.058   6 9.8217 0.3442 22.0, 84.67 1.29
C57BL/6J f 56.0 15.945   7 6.0266 0.2847 35.33, 76.67 0.34
C57BL/6J m 39.112 14.761   6 6.0262 0.3774 24.67, 64.67 -1.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 56.835 10.3903312618 77.2722114674 36.3977885326
129S1/SvImJ 2 56.1675 10.3903312618 76.6047114674 35.7302885326
A/J 1 60.4433333333 11.9977211019 84.0421924177 36.8444742489
A/J 2 68.89 11.9977211019 92.4888590844 45.2911409156
AKR/J 1 60.0 9.293394804 78.2795976447 41.7204023553
AKR/J 2 47.6666666667 8.4836699499 64.3535799535 30.9797533798
ALR/LtJ 1 55.7783333333 8.4836699499 72.4652466202 39.0914200465
ALR/LtJ 2 54.664 9.293394804 72.9435976447 36.3844023553
ALS/LtJ 1 45.5533333333 8.4836699499 62.2402466202 28.8664200465
ALS/LtJ 2 50.33375 7.347073694 64.7850408172 35.8824591828
BALB/cJ 1 25.41625 7.347073694 39.8675408172 10.9649591828
BALB/cJ 2 32.7325 10.3903312618 53.1697114674 12.2952885326
BPH/2J 1 66.4742857143 7.8543521595 81.9233654384 51.0252059902
BPH/2J 2 55.8916666667 8.4836699499 72.5785799535 39.2047533798
BPL/1J 1 36.134 9.293394804 54.4135976447 17.8544023553
BPL/1J 2 69.89 8.4836699499 86.5769132868 53.2030867132
BPN/3J 1 63.066 9.293394804 81.3455976447 44.7864023553
BPN/3J 2 43.62 7.8543521595 59.0690797241 28.1709202759
BTBR T+ Itpr3tf/J 1 54.802 9.293394804 73.0815976447 36.5224023553
BTBR T+ Itpr3tf/J 2 64.439 6.5714224862 77.3646274519 51.5133725481
BUB/BnJ 1 57.62 7.8543521595 73.0690797241 42.1709202759
BUB/BnJ 2 41.1675 10.3903312618 61.6047114674 20.7302885326
C3H/HeJ 1 39.66625 7.347073694 54.1175408172 25.2149591828
C3H/HeJ 2 34.4771428571 7.8543521595 49.9262225813 19.028063133
C57BL/10J 1 56.0 7.8543521595 71.4490797241 40.5509202759
C57BL/10J 2 39.1116666667 8.4836699499 55.7985799535 22.4247533798
C57BL/6J 1 47.665 8.4836699499 64.3519132868 30.9780867132
C57BL/6J 2 62.3333333333 8.4836699499 79.0202466202 45.6464200465
C57BLKS/J 1 66.2233333333 11.9977211019 89.8221924177 42.6244742489
C57BLKS/J 2 60.0825 7.347073694 74.5337908172 45.6312091828
C57BR/cdJ 1 37.335 14.6941473879 66.2375816343 8.4324183657
C57BR/cdJ 2 68.4 9.293394804 86.6795976447 50.1204023553
C57L/J 1 60.9690909091 6.2656054987 73.293193127 48.6449886912
C57L/J 2 46.934 9.293394804 65.2135976447 28.6544023553
C58/J 1 60.335 8.4836699499 77.0219132868 43.6480867132
C58/J 2 38.50125 7.347073694 52.9525408172 24.0499591828
CAST/EiJ 1 51.5566666667 8.4836699499 68.2435799535 34.8697533798
CAST/EiJ 2 74.1675 10.3903312618 94.6047114674 53.7302885326
CBA/J 1 61.7783333333 8.4836699499 78.4652466202 45.0914200465
CBA/J 2 48.1675 10.3903312618 68.6047114674 27.7302885326
CE/J 1 67.332 9.293394804 85.6115976447 49.0524023553
CE/J 2 58.666 9.293394804 76.9455976447 40.3864023553
DBA/2J 1 61.9042857143 7.8543521595 77.3533654384 46.4552059902
DBA/2J 2 74.0025 10.3903312618 94.4397114674 53.5652885326
FVB/NJ 1 52.7728571429 7.8543521595 68.221936867 37.3237774187
FVB/NJ 2 57.7128571429 7.8543521595 73.161936867 42.2637774187
I/LnJ 1 57.555 8.4836699499 74.2419132868 40.8680867132
I/LnJ 2 48.805 10.3903312618 69.2422114674 28.3677885326
KK/HlJ 1 59.4425 10.3903312618 79.8797114674 39.0052885326
KK/HlJ 2 63.2216666667 8.4836699499 79.9085799535 46.5347533798
LP/J 1 41.665 10.3903312618 62.1022114674 21.2277885326
LP/J 2 62.27 9.293394804 80.5495976447 43.9904023553
MA/MyJ 1 69.1428571429 7.8543521595 84.591936867 53.6937774187
MA/MyJ 2 61.745 8.4836699499 78.4319132868 45.0580867132
NOD/ShiLtJ 1 35.1675 10.3903312618 55.6047114674 14.7302885326
NOD/ShiLtJ 2 45.334 9.293394804 63.6135976447 27.0544023553
NON/ShiLtJ 1 37.2611111111 6.9268875078 50.8859187561 23.6363034662
NON/ShiLtJ 2 33.3333333333 8.4836699499 50.0202466202 16.6464200465
NZB/BlNJ 1 55.066 9.293394804 73.3455976447 36.7864023553
NZB/BlNJ 2 52.266 9.293394804 70.5455976447 33.9864023553
NZW/LacJ 1 27.11 11.9977211019 50.7088590844 3.5111409156
NZW/LacJ 2 59.335 14.6941473879 88.2375816343 30.4324183657
PL/J 1 34.3325 10.3903312618 54.7697114674 13.8952885326
PL/J 2 34.7783333333 8.4836699499 51.4652466202 18.0914200465
RBF/DnJ 1 77.5 10.3903312618 97.9372114674 57.0627885326
RBF/DnJ 2 52.0 11.9977211019 75.5988590844 28.4011409156
RIIIS/J 1 32.7766666667 8.4836699499 49.4635799535 16.0897533798
RIIIS/J 2 65.5566666667 8.4836699499 82.2435799535 48.8697533798
SEA/GnJ 1 54.562 9.293394804 72.8415976447 36.2824023553
SEA/GnJ 2 62.666 9.293394804 80.9455976447 44.3864023553
SJL/J 1 63.3325 10.3903312618 83.7697114674 42.8952885326
SJL/J 2 47.6 9.293394804 65.8795976447 29.3204023553
SM/J 1 49.665 10.3903312618 70.1022114674 29.2277885326
SM/J 2 75.598 9.293394804 93.8775976447 57.3184023553
SWR/J 1 54.5714285714 7.8543521595 70.0205082955 39.1223488473
SWR/J 2 56.666 9.293394804 74.9455976447 38.3864023553


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 56.50125 7.347073694 70.9525408172 42.0499591828
A/J both 64.6666666667 8.4836699499 81.3535799535 47.9797533798
AKR/J both 53.8333333333 6.2916580248 66.2086794405 41.4579872261
ALR/LtJ both 55.2211666667 6.2916580248 67.5965127739 42.8458205595
ALS/LtJ both 47.9435416667 5.6114202232 58.9808973432 36.9061859901
BALB/cJ both 29.074375 6.3627524624 41.5895599651 16.5591900349
BPH/2J both 61.1829761905 5.7806466694 72.5531910012 49.8127613798
BPL/1J both 53.012 6.2916580248 65.3873461072 40.6366538928
BPN/3J both 53.343 6.0839550218 65.3098056971 41.3761943029
BTBR T+ Itpr3tf/J both 59.6205 5.691018812 70.8144217332 48.4265782668
BUB/BnJ both 49.39375 6.5124847711 62.2034502003 36.5840497997
C3H/HeJ both 37.0716964286 5.3775073154 47.6489582506 26.4944346066
C57BL/10J both 47.5558333333 5.7806466694 58.926048144 36.1856185226
C57BL/6J both 54.9991666667 5.9988605509 66.7985962089 43.1997371245
C57BLKS/J both 63.1529166667 7.0342875173 76.9889742371 49.3168590963
C57BR/cdJ both 52.8675 8.6931748292 69.9664978886 35.7685021114
C57L/J both 53.9515454545 5.6041279261 64.9745575829 42.9285333262
C58/J both 49.418125 5.6114202232 60.4554806766 38.3807693234
CAST/EiJ both 62.8620833333 6.7069299897 76.0542466094 49.6699200573
CBA/J both 54.9729166667 6.7069299897 68.1650799427 41.7807533906
CE/J both 62.999 6.5714224862 75.9246274519 50.0733725481
DBA/2J both 67.9533928571 6.5124847711 80.7630930574 55.1436926568
FVB/NJ both 55.2428571429 5.5538656738 66.1670061789 44.3187081068
I/LnJ both 53.18 6.7069299897 66.372163276 39.987836724
KK/HlJ both 61.3320833333 6.7069299897 74.5242466094 48.1399200573
LP/J both 51.9675 6.970046103 65.6771982335 38.2578017665
MA/MyJ both 65.4439285714 5.7806466694 76.8141433821 54.0737137607
NOD/ShiLtJ both 40.25075 6.970046103 53.9604482335 26.5410517665
NON/ShiLtJ both 35.2972222222 5.4761854051 46.0685784321 24.5258660123
NZB/BlNJ both 53.666 6.5714224862 66.5916274519 40.7403725481
NZW/LacJ both 43.2225 9.4850313534 61.879036222 24.565963778
PL/J both 34.5554166667 6.7069299897 47.7475799427 21.3632533906
RBF/DnJ both 64.75 7.9357465838 80.3591780905 49.1408219095
RIIIS/J both 49.1666666667 5.9988605509 60.9660962089 37.3672371245
SEA/GnJ both 58.614 6.5714224862 71.5396274519 45.6883725481
SJL/J both 55.46625 6.970046103 69.1759482335 41.7565517665
SM/J both 62.6315 6.970046103 76.3411982335 48.9218017665
SWR/J both 55.6187142857 6.0839550218 67.5855199829 43.6519085886




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA