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Project measure / variable:   Project1194   idc_ambulatory_activity__light_dark_ratio__beam_breaks__x_y_axis

ID, description, units MPD:129940   idc_ambulatory_activity__light_dark_ratio__beam_breaks__x_y_axis   idc_ambulatory_activity__light_dark_ratio__beam_breaks__x_y_axis    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - idc_ambulatory_activity__light_dark_ratio__beam_breaks__x_y_axis



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.48971   None 0.45421   None
Median of the strain means0.47057   None 0.47158   None
SD of the strain means± 0.14316 ± 0.14589
Coefficient of variation (CV)0.2923 0.3212
Min–max range of strain means0.34374   –   0.79112   None 0.20223   –   0.72567   None
Mean sample size per strain10.3   mice 9.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.001 0.001 0.05 0.8234
strain 9 2.5449 0.2828 13.9466 < 0.0001
sex:strain 9 0.2232 0.0248 1.2233 0.2832
Residuals 179 3.6293 0.0203


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 0.54098 0.08707   19 0.01998 0.1609 0.39458, 0.74006 0.36
C57BL/6J m 0.44698 0.12594   17 0.03054 0.2818 0.30414, 0.69635 -0.05
GAIA/NachJ f 0.58095 0.12551   10 0.03969 0.216 0.40427, 0.75591 0.64
GAIA/NachJ m 0.55946 0.16778   15 0.04332 0.2999 0.339, 0.98461 0.72
GAIC/NachJ f 0.3888 0.17685   2   0.12506 0.4549 0.26375, 0.51386 -0.7
GAIC/NachJ m 0.48694 0.3839   2   0.27145 0.7884 0.21548, 0.75839 0.22
MANB/NachJ f 0.36022 0.16989   10 0.05372 0.4716 0.20484, 0.67882 -0.9
MANB/NachJ m 0.48347 0.21561   9 0.07187 0.446 0.15858, 0.84632 0.2
MANE/NachJ f 0.60171 0.21228   5 0.09493 0.3528 0.4112, 0.95616 0.78
MANE/NachJ m 0.5024 0.21912   6 0.08946 0.4362 0.3124, 0.88486 0.33
MANF/NachJ f 0.34844 0.14234   20 0.03183 0.4085 0.17512, 0.63375 -0.99
MANF/NachJ m 0.26086 0.11933   12 0.03445 0.4574 0.1432, 0.53739 -1.33
SARA/NachJ f 0.79112 0.0957   4 0.04785 0.121 0.65949, 0.88269 2.11
SARA/NachJ m 0.72567 0.18437   9 0.06146 0.2541 0.4869, 1.13 1.86
SARB/NachJ f 0.44637 0.11796   8 0.0417 0.2643 0.29289, 0.66484 -0.3
SARB/NachJ m 0.41442 0.06417   9 0.02139 0.1548 0.32773, 0.53301 -0.27
SARC/NachJ f 0.49477 0.11511   18 0.02713 0.2326 0.2435, 0.6799 0.04
SARC/NachJ m 0.45969 0.12544   14 0.03352 0.2729 0.25095, 0.67804 0.04
TUCB/NachJ f 0.34374 0.09769   7 0.03693 0.2842 0.2315, 0.50871 -1.02
TUCB/NachJ m 0.20223 0.08397   3 0.04848 0.4152 0.10618, 0.2617 -1.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 0.360221 0.0450279365 0.4490748717 0.2713671283
129S1/SvImJ 2 0.4834666667 0.0474636125 0.5771268711 0.3898064622
A/J 1 0.60171 0.0636791184 0.7273683504 0.4760516496
A/J 2 0.502405 0.058130816 0.6171148551 0.3876951449
BALB/cJ 1 0.348436 0.0318395592 0.4112651752 0.2856068248
BALB/cJ 2 0.2608583333 0.0411046942 0.3419704497 0.1797462169
BTBR T+ Itpr3tf/J 1 0.580951 0.0450279365 0.6698048717 0.4920971283
BTBR T+ Itpr3tf/J 2 0.559464 0.0367651562 0.6320128824 0.4869151176
C3H/HeJ 1 0.7911225 0.0711954188 0.9316128067 0.6506321933
C3H/HeJ 2 0.7256688889 0.0474636125 0.8193290934 0.6320086844
C57BL/6J 1 0.3437371429 0.0538186779 0.4499378323 0.2375364534
C57BL/6J 2 0.2022333333 0.0822093884 0.3644575661 0.0400091005
CAST/EiJ 1 0.388805 0.1006855268 0.5874882971 0.1901217029
CAST/EiJ 2 0.486935 0.1006855268 0.6856182971 0.2882517029
DBA/2J 1 0.4463725 0.0503427634 0.5457141486 0.3470308514
DBA/2J 2 0.4144222222 0.0474636125 0.5080824267 0.3207620177
FVB/NJ 1 0.4947688889 0.0335618423 0.5609966546 0.4285411232
FVB/NJ 2 0.4596864286 0.0380555521 0.5347816563 0.3845912009
LP/J 1 0.5409810526 0.0326666985 0.6054424263 0.476519679
LP/J 2 0.4469829412 0.0345348508 0.5151307499 0.3788351325


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.4218438333 0.0327120374 0.4863946746 0.3572929921
A/J both 0.5520575 0.043110967 0.6371286054 0.4669863946
BALB/cJ both 0.3046471667 0.0259968912 0.3559469734 0.2533473599
BTBR T+ Itpr3tf/J both 0.5702075 0.029065408 0.6275624275 0.5128525725
C3H/HeJ both 0.7583956944 0.0427831222 0.8428198619 0.673971527
C57BL/6J both 0.2729852381 0.0491295065 0.3699327602 0.176037716
CAST/EiJ both 0.43787 0.0711954188 0.5783603067 0.2973796933
DBA/2J both 0.4303973611 0.0345947552 0.4986633795 0.3621313428
FVB/NJ both 0.4772276587 0.0253703681 0.5272911439 0.4271641736
LP/J both 0.4939819969 0.0237685144 0.5408845355 0.4470794583




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA