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Project measure / variable:   Project1194   lightdark_vertical_episode_count__query__light__pct_total

ID, description, units MPD:129930   lightdark_vertical_episode_count__query__light__pct_total   lightdark_vertical_episode_count__query__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_episode_count__query__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means60.75   None 62.94   None
Median of the strain means62.26   None 64.82   None
SD of the strain means± 6.7981 ± 8.7058
Coefficient of variation (CV)0.1119 0.1383
Min–max range of strain means50.3   –   69.85   None 44.869   –   71.62   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 205.1428 205.1428 0.9961 0.3195
strain 9 6106.1566 678.4618 3.2945 0.0009
sex:strain 9 2898.5508 322.0612 1.5639 0.1285
Residuals 194 39951.8389 205.9373


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 56.8 15.555   21 3.3944 0.2738 19.048, 83.33 -0.58
C57BL/6J m 64.08 10.165   22 2.1672 0.1586 43.59, 84.62 0.13
GAIA/NachJ f 63.64 9.0254   10 2.8541 0.1418 51.46, 80.52 0.42
GAIA/NachJ m 56.43 8.1088   15 2.0937 0.1437 33.333, 68.67 -0.75
GAIC/NachJ f 62.67 3.4919   3 2.0161 0.0557 60.23, 66.67 0.28
GAIC/NachJ m 71.59 4.3346   2   3.065 0.0606 68.52, 74.65 0.99
MANB/NachJ f 66.33 12.157   11 3.6655 0.1833 48.148, 86.36 0.82
MANB/NachJ m 65.57 7.9671   10 2.5194 0.1215 54.0, 77.19 0.3
MANE/NachJ f 69.85 5.6402   5 2.5224 0.0808 62.5, 76.83 1.34
MANE/NachJ m 68.42 16.953   5 7.5815 0.2478 47.059, 87.88 0.63
MANF/NachJ f 68.62 7.2408   20 1.6191 0.1055 55.13, 83.58 1.16
MANF/NachJ m 62.46 12.775   12 3.6878 0.2045 45.714, 90.24 -0.06
SARA/NachJ f 50.3 10.642   4 5.3208 0.2116 43.21, 66.1 -1.54
SARA/NachJ m 70.04 12.503   10 3.9538 0.1785 52.94, 87.5 0.82
SARB/NachJ f 61.85 14.914   7 5.6371 0.2411 32.143, 77.5 0.16
SARB/NachJ m 71.62 5.3905   11 1.6253 0.0753 61.45, 80.0 1.0
SARC/NachJ f 52.4 24.149   19 5.54 0.4609 -1.23
SARC/NachJ m 54.33 21.783   17 5.2833 0.4009 -0.99
TUCB/NachJ f 55.07 14.014   7 5.2969 0.2545 40.741, 81.82 -0.84
TUCB/NachJ m 44.869 35.279   3 20.368 0.7863 4.1667, 66.67 -2.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 66.3343636364 4.3268434187 74.8680564296 57.8006708432
129S1/SvImJ 2 65.573 4.5380316621 74.5232125091 56.6227874909
A/J 1 69.846 6.4177459231 82.5035119165 57.1884880835
A/J 2 68.4158 6.4177459231 81.0733119165 55.7582880835
BALB/cJ 1 68.624 3.2088729615 74.9527559582 62.2952440418
BALB/cJ 2 62.4641666667 4.14263718 70.6345554761 54.2937778572
BTBR T+ Itpr3tf/J 1 63.635 4.5380316621 72.5852125091 54.6847874909
BTBR T+ Itpr3tf/J 2 56.4324 3.7052873363 63.7402179122 49.1245820878
C3H/HeJ 1 50.29625 7.1752580732 64.4477785356 36.1447214644
C3H/HeJ 2 70.042 4.5380316621 78.9922125091 61.0917874909
C57BL/6J 1 55.0681428571 5.4239852727 65.7656929076 44.3705928067
C57BL/6J 2 44.8689 8.2852743601 61.209677619 28.528122381
CAST/EiJ 1 62.67 8.2852743601 79.010777619 46.329222381
CAST/EiJ 2 71.585 10.1473472806 91.5982835834 51.5717164166
DBA/2J 1 61.8504285714 5.4239852727 72.5479786219 51.152878521
DBA/2J 2 71.6181818182 4.3268434187 80.1518746114 63.084489025
FVB/NJ 1 52.3963157895 3.2922341931 58.8894823982 45.9031491807
FVB/NJ 2 54.3311705882 3.4805114031 61.1956702254 47.466670951
LP/J 1 56.804952381 3.1315393573 62.9811857823 50.6287189796
LP/J 2 64.0831818182 3.0595403225 70.1174138608 58.0489497755


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 65.9536818182 3.1350959051 72.1369296833 59.7704339531
A/J both 69.1309 4.5380316621 78.0811125091 60.1806874909
BALB/cJ both 65.5440833333 2.6200338017 70.7114909348 60.3766757319
BTBR T+ Itpr3tf/J both 60.0337 2.929286842 65.8110373321 54.2563626679
C3H/HeJ both 60.169125 4.2449399225 68.5412821869 51.7969678131
C57BL/6J both 49.9685214286 4.9513984757 59.734003883 40.2030389741
CAST/EiJ both 67.1275 6.5500845043 80.0460190036 54.2089809964
DBA/2J both 66.7343051948 3.4691926369 73.5764811968 59.8921291928
FVB/NJ both 53.3637431889 2.3954522334 58.0882158546 48.6392705231
LP/J both 60.4440670996 2.1890252243 64.7614104775 56.1267237216




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA