Project measure / variable:   Project1194   lightdark_vertical_episode_count__centroid__light__pct_total

ID, description, units MPD:129928   lightdark_vertical_episode_count__centroid__light__pct_total   lightdark_vertical_episode_count__centroid__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_episode_count__centroid__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means60.69   None 62.95   None
Median of the strain means62.26   None 64.82   None
SD of the strain means± 6.7907 ± 8.7136
Coefficient of variation (CV)0.1119 0.1384
Min–max range of strain means50.3   –   69.85   None 44.869   –   71.62   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 226.657 226.657 1.0989 0.2958
strain 9 6090.7778 676.7531 3.2812 0.001
sex:strain 9 2933.2084 325.912 1.5801 0.1234
Residuals 194 40013.3867 206.2546


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 56.48 15.479   21 3.3777 0.274 19.048, 83.33 -0.62
C57BL/6J m 64.08 10.165   22 2.1672 0.1586 43.59, 84.62 0.13
GAIA/NachJ f 63.69 8.9515   10 2.8307 0.1406 51.96, 80.52 0.44
GAIA/NachJ m 56.43 8.1088   15 2.0937 0.1437 33.333, 68.67 -0.75
GAIC/NachJ f 62.67 3.4919   3 2.0161 0.0557 60.23, 66.67 0.29
GAIC/NachJ m 71.59 4.3346   2   3.065 0.0606 68.52, 74.65 0.99
MANB/NachJ f 65.98 12.703   11 3.8302 0.1925 46.687, 86.36 0.78
MANB/NachJ m 65.57 7.9671   10 2.5194 0.1215 54.0, 77.19 0.3
MANE/NachJ f 69.85 5.6402   5 2.5224 0.0808 62.5, 76.83 1.35
MANE/NachJ m 68.53 16.842   5 7.5321 0.2458 47.059, 87.88 0.64
MANF/NachJ f 68.62 7.2408   20 1.6191 0.1055 55.13, 83.58 1.17
MANF/NachJ m 62.46 12.775   12 3.6878 0.2045 45.714, 90.24 -0.06
SARA/NachJ f 50.3 10.642   4 5.3208 0.2116 43.21, 66.1 -1.53
SARA/NachJ m 70.04 12.503   10 3.9538 0.1785 52.94, 87.5 0.81
SARB/NachJ f 61.85 14.914   7 5.6371 0.2411 32.143, 77.5 0.17
SARB/NachJ m 71.62 5.3905   11 1.6253 0.0753 61.45, 80.0 0.99
SARC/NachJ f 52.4 24.149   19 5.54 0.4609 -1.22
SARC/NachJ m 54.33 21.783   17 5.2833 0.4009 -0.99
TUCB/NachJ f 55.07 14.014   7 5.2969 0.2545 40.741, 81.82 -0.83
TUCB/NachJ m 44.869 35.279   3 20.368 0.7863 4.1667, 66.67 -2.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 65.9822727273 4.3301749976 74.5225362853 57.4420091692
129S1/SvImJ 2 65.573 4.5415258516 74.5301039854 56.6158960146
A/J 1 69.846 6.4226874531 82.5132579358 57.1787420642
A/J 2 68.5298 6.4226874531 81.1970579358 55.8625420642
BALB/cJ 1 68.624 3.2113437266 74.9576289679 62.2903710321
BALB/cJ 2 62.4641666667 4.145826924 70.6408465045 54.2874868288
BTBR T+ Itpr3tf/J 1 63.685 4.5415258516 72.6421039854 54.7278960146
BTBR T+ Itpr3tf/J 2 56.4324 3.70814033 63.7458447791 49.1189552209
C3H/HeJ 1 50.29625 7.1807828717 64.4586749164 36.1338250836
C3H/HeJ 2 70.042 4.5415258516 78.9991039854 61.0848960146
C57BL/6J 1 55.0681428571 5.4281616278 65.7739297973 44.362355917
C57BL/6J 2 44.8689 8.291653848 61.2222596758 28.5155403242
CAST/EiJ 1 62.67 8.291653848 79.0233596758 46.3166403242
CAST/EiJ 2 71.585 10.1551605257 91.6136933929 51.5563066071
DBA/2J 1 61.8504285714 5.4281616278 72.5562155116 51.1446416313
DBA/2J 2 71.6181818182 4.3301749976 80.1584453763 63.0779182601
FVB/NJ 1 52.3963157895 3.2947691446 58.8944820007 45.8981495783
FVB/NJ 2 54.3311705882 3.4831913241 61.2009557465 47.46138543
LP/J 1 56.4825714286 3.133950577 62.6635604004 50.3015824568
LP/J 2 64.0831818182 3.0618961045 70.1220600932 58.0443035432


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 65.7776363636 3.1375098633 71.9656452002 59.589627527
A/J both 69.1879 4.5415258516 78.1450039854 60.2307960146
BALB/cJ both 65.5440833333 2.6220511729 70.7154697305 60.3726969362
BTBR T+ Itpr3tf/J both 60.0587 2.9315423316 65.840485761 54.276914239
C3H/HeJ both 60.169125 4.2482084374 68.5477285728 51.7905214272
C57BL/6J both 49.9685214286 4.9552109489 59.7415231002 40.195519757
CAST/EiJ both 67.1275 6.5551279323 80.0559659928 54.1990340072
DBA/2J both 66.7343051948 3.4718638426 73.5817495292 59.8868608604
FVB/NJ both 53.3637431889 2.3972966815 58.0918535997 48.635632778
LP/J both 60.2828766234 2.1907107279 64.6035442654 55.9622089814




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA