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Project measure / variable:   Project1194   lightdark_vertical_activity_time__crossover__light__pct_total

ID, description, units MPD:129925   lightdark_vertical_activity_time__crossover__light__pct_total   lightdark_vertical_activity_time__crossover__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_activity_time__crossover__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means70.59   None 71.63   None
Median of the strain means73.53   None 72.47   None
SD of the strain means± 8.4203 ± 11.699
Coefficient of variation (CV)0.1193 0.1633
Min–max range of strain means56.44   –   80.46   None 55.61   –   89.99   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.6154 0.6154 0.0019 0.9656
strain 9 12690.9635 1410.1071 4.273 < 0.0001
sex:strain 9 2960.4173 328.9353 0.9968 0.4441
Residuals 194 64020.5336 330.0028


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 72.45 17.046   21 3.7198 0.2353 38.095, 99.0 0.22
C57BL/6J m 73.68 13.834   22 2.9493 0.1878 45.235, 95.79 0.18
GAIA/NachJ f 66.25 12.202   10 3.8587 0.1842 45.082, 83.49 -0.52
GAIA/NachJ m 58.79 9.0879   15 2.3465 0.1546 32.483, 68.36 -1.1
GAIC/NachJ f 80.46 9.4697   3 5.4673 0.1177 71.53, 90.39 1.17
GAIC/NachJ m 89.99 5.275   2   3.73 0.0586 86.26, 93.72 1.57
MANB/NachJ f 76.34 17.29   11 5.2132 0.2265 37.325, 100.0 0.68
MANB/NachJ m 77.5 10.726   10 3.392 0.1384 63.06, 93.09 0.5
MANE/NachJ f 79.15 12.665   5 5.6641 0.16 62.64, 89.26 1.02
MANE/NachJ m 69.78 21.247   5 9.5018 0.3045 38.246, 90.71 -0.16
MANF/NachJ f 76.37 9.4641   20 2.1162 0.1239 58.86, 91.09 0.69
MANF/NachJ m 71.27 14.004   12 4.0426 0.1965 46.172, 99.14 -0.03
SARA/NachJ f 56.44 14.142   4 7.0709 0.2506 39.712, 68.4 -1.68
SARA/NachJ m 79.31 14.621   10 4.6234 0.1844 53.5, 96.57 0.66
SARB/NachJ f 74.61 25.205   7 9.5267 0.3378 22.755, 95.06 0.48
SARB/NachJ m 83.73 7.569   11 2.2821 0.0904 68.12, 92.96 1.03
SARC/NachJ f 59.44 29.6   19 6.7906 0.498 -1.32
SARC/NachJ m 56.61 29.102   17 7.0583 0.5141 -1.28
TUCB/NachJ f 64.43 15.336   7 5.7964 0.238 43.767, 86.68 -0.73
TUCB/NachJ m 55.61 41.92   3 24.203 0.7538 7.4338, 83.76 -1.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 76.3404545455 5.4772484024 87.1430537374 65.5378553535
129S1/SvImJ 2 77.495 5.744586588 88.8248616157 66.1651383843
A/J 1 79.15 8.124072263 95.1728439567 63.1271560433
A/J 2 69.7772 8.124072263 85.8000439567 53.7543560433
BALB/cJ 1 76.3715 4.0620361315 84.3829219784 68.3600780216
BALB/cJ 2 71.2726666667 5.2440660964 81.6153679672 60.9299653661
BTBR T+ Itpr3tf/J 1 66.2496 5.744586588 77.5794616157 54.9197383843
BTBR T+ Itpr3tf/J 2 58.7902 4.690435308 68.0409932716 49.5394067284
C3H/HeJ 1 56.435 9.0829889171 74.3490841401 38.5209158599
C3H/HeJ 2 79.306 5.744586588 90.6358616157 67.9761383843
C57BL/6J 1 64.4252857143 6.8660942388 77.9670604572 50.8835109714
C57BL/6J 2 55.6112666667 10.4881321927 76.2966692678 34.9258640655
CAST/EiJ 1 80.46 10.4881321927 101.1454026011 59.7745973989
CAST/EiJ 2 89.99 12.8452861135 115.3243407484 64.6556592516
DBA/2J 1 74.615 6.8660942388 88.1567747429 61.0732252571
DBA/2J 2 83.7263636364 5.4772484024 94.5289628283 72.9237644445
FVB/NJ 1 59.4379473684 4.1675611363 67.6574928877 51.2184018492
FVB/NJ 2 56.6128970588 4.4058967884 65.3025042466 47.9232898711
LP/J 1 72.4543333333 3.9641413571 80.2726806264 64.6359860402
LP/J 2 73.6802272727 3.8729994876 81.3188184158 66.0416361297


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 76.9177272727 3.9686435066 84.7449540091 69.0905005363
A/J both 74.4636 5.744586588 85.7934616157 63.1337383843
BALB/cJ both 73.8220833333 3.316638613 80.363381987 67.2807846796
BTBR T+ Itpr3tf/J both 62.5199 3.7081146977 69.8332942254 55.2065057746
C3H/HeJ both 67.8705 5.3735687103 78.4686151014 57.2723848986
C57BL/6J both 60.0182761905 6.2678578276 72.3801686827 47.6563836982
CAST/EiJ both 85.225 8.2915965325 101.5782466343 68.8717533657
DBA/2J both 79.1706818182 4.3915686309 87.8320300459 70.5093335904
FVB/NJ both 58.0254222136 3.0323461352 64.0060200437 52.0448243836
LP/J both 73.067280303 2.7710350832 78.5325028293 67.6020577768




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA