Project measure / variable:   Project1194   lightdark_vertical_activity_count__query__light__pct_total

ID, description, units MPD:129922   lightdark_vertical_activity_count__query__light__pct_total   lightdark_vertical_activity_count__query__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_activity_count__query__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means62.55   None 65.23   None
Median of the strain means62.72   None 66.97   None
SD of the strain means± 6.2252 ± 9.475
Coefficient of variation (CV)0.0995 0.1453
Min–max range of strain means51.03   –   69.95   None 51.38   –   78.05   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 131.1234 131.1234 0.503 0.479
strain 9 7168.9872 796.5541 3.0555 0.0019
sex:strain 9 3371.6086 374.6232 1.437 0.1745
Residuals 194 50575.0867 260.6963


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 61.66 17.883   21 3.9023 0.29 22.222, 84.0 -0.14
C57BL/6J m 67.27 10.791   22 2.3007 0.1604 47.059, 86.54 0.22
GAIA/NachJ f 62.49 12.811   10 4.0512 0.205 42.814, 80.92 -0.01
GAIA/NachJ m 54.52 8.3443   15 2.1545 0.1531 30.337, 67.82 -1.13
GAIC/NachJ f 67.55 6.2182   3 3.5901 0.0921 63.92, 74.73 0.8
GAIC/NachJ m 78.05 6.2579   2   4.425 0.0802 73.62, 82.47 1.35
MANB/NachJ f 66.88 16.918   11 5.1009 0.253 31.447, 91.67 0.7
MANB/NachJ m 68.27 9.6425   10 3.0492 0.1413 55.15, 82.35 0.32
MANE/NachJ f 68.77 10.461   5 4.6783 0.1521 56.71, 79.14 1.0
MANE/NachJ m 66.67 15.343   5 6.8616 0.2301 46.154, 79.01 0.15
MANF/NachJ f 69.95 9.5743   20 2.1409 0.1369 49.342, 88.89 1.19
MANF/NachJ m 63.61 14.723   12 4.25 0.2315 38.462, 94.05 -0.17
SARA/NachJ f 51.03 7.0581   4 3.529 0.1383 44.444, 60.83 -1.85
SARA/NachJ m 73.5 13.041   10 4.1239 0.1774 51.61, 86.96 0.87
SARB/NachJ f 62.95 18.876   7 7.1346 0.2999 24.92, 78.63 0.06
SARB/NachJ m 75.67 6.7754   11 2.0429 0.0895 64.8, 85.71 1.1
SARC/NachJ f 54.05 25.906   19 5.9432 0.4793 -1.37
SARC/NachJ m 53.33 23.756   17 5.7617 0.4454 -1.26
TUCB/NachJ f 60.17 14.309   7 5.4082 0.2378 44.231, 86.15 -0.38
TUCB/NachJ m 51.38 40.903   3 23.615 0.7961 4.3478, 78.67 -1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 66.8796363636 4.8682302481 76.481088823 57.2781839043
129S1/SvImJ 2 68.265 5.1058429591 78.3350882947 58.1949117053
A/J 1 68.774 7.2207523601 83.0152554406 54.5327445594
A/J 2 66.6708 7.2207523601 80.9120554406 52.4295445594
BALB/cJ 1 69.9466 3.61037618 77.0672277203 62.8259722797
BALB/cJ 2 63.6064166667 4.6609756063 72.7991075251 54.4137258082
BTBR T+ Itpr3tf/J 1 62.4853 5.1058429591 72.5553882947 52.4152117053
BTBR T+ Itpr3tf/J 2 54.5172666667 4.1689033189 62.7394593289 46.2950740044
C3H/HeJ 1 51.02675 8.0730465629 66.9489576251 35.1045423749
C3H/HeJ 2 73.498 5.1058429591 83.5680882947 63.4279117053
C57BL/6J 1 60.1664285714 6.1026495795 72.2024861997 48.1303709431
C57BL/6J 2 51.3759333333 9.3219512126 69.7613150502 32.9905516165
CAST/EiJ 1 67.55 9.3219512126 85.9353817169 49.1646182831
CAST/EiJ 2 78.045 11.417011939 100.5624019663 55.5275980337
DBA/2J 1 62.9457142857 6.1026495795 74.981771914 50.9096566574
DBA/2J 2 75.6709090909 4.8682302481 85.2723615503 66.0694566315
FVB/NJ 1 54.0481578947 3.7041678036 61.353767789 46.7425480004
FVB/NJ 2 53.3315058824 3.9160027882 61.054911039 45.6081007257
LP/J 1 61.6586666667 3.5233663775 68.6076877784 54.709645555
LP/J 2 67.2672272727 3.4423586208 74.056479416 60.4779751295


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 67.5723181818 3.5273679306 74.5292314268 60.6154049368
A/J both 67.7224 5.1058429591 77.7924882947 57.6523117053
BALB/cJ both 66.7765083333 2.9478598069 72.590476521 60.9625401456
BTBR T+ Itpr3tf/J both 58.5012833333 3.2958074582 65.0014973767 52.00106929
C3H/HeJ both 62.262375 4.7760787559 71.6820800633 52.8426699367
C57BL/6J both 55.7711809524 5.570931392 66.7585480632 44.7838138416
CAST/EiJ both 72.7975 7.3696495172 87.3324204692 58.2625795308
DBA/2J both 69.3083116883 3.903267786 77.0066000137 61.6100233629
FVB/NJ both 53.6898318885 2.6951779605 59.0054438745 48.3742199026
LP/J both 64.4629469697 2.4629222229 69.3204885052 59.6054054342




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA