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Project measure / variable:   Project1194   lightdark_stereotypic_activity_count__centroid__light__pct_total

ID, description, units MPD:129892   lightdark_stereotypic_activity_count__centroid__light__pct_total   lightdark_stereotypic_activity_count__centroid__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_activity_count__centroid__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means37.649   None 37.385   None
Median of the strain means38.888   None 39.971   None
SD of the strain means± 7.7982 ± 9.7036
Coefficient of variation (CV)0.2071 0.2596
Min–max range of strain means20.646   –   47.442   None 18.308   –   48.453   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 189.619 189.619 1.371 0.2431
strain 9 6489.3394 721.0377 5.2133 < 0.0001
sex:strain 9 754.4585 83.8287 0.6061 0.791
Residuals 194 26831.5167 138.3068


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 41.081 11.179   21 2.4395 0.2721 24.199, 66.88 0.44
C57BL/6J m 43.601 13.176   22 2.8091 0.3022 23.305, 63.22 0.64
GAIA/NachJ f 42.172 11.937   10 3.7747 0.283 27.511, 62.94 0.58
GAIA/NachJ m 39.599 9.1441   15 2.361 0.2309 22.112, 51.19 0.23
GAIC/NachJ f 32.468 23.78   3 13.729 0.7324 17.114, 59.86 -0.66
GAIC/NachJ m 22.687 6.4863   2   4.5865 0.2859 18.1, 27.273 -1.51
MANB/NachJ f 38.278 10.866   11 3.2762 0.2839 20.321, 59.86 0.08
MANB/NachJ m 39.913 11.642   10 3.6817 0.2917 16.129, 52.6 0.26
MANE/NachJ f 47.442 5.3425   5 2.3892 0.1126 39.568, 54.43 1.26
MANE/NachJ m 44.327 9.6323   5 4.3077 0.2173 34.47, 57.84 0.72
MANF/NachJ f 38.415 9.5907   20 2.1445 0.2497 22.727, 62.16 0.1
MANF/NachJ m 34.134 9.1525   12 2.6421 0.2681 14.679, 50.36 -0.34
SARA/NachJ f 31.3 16.091   4 8.0454 0.5141 12.093, 47.15 -0.81
SARA/NachJ m 40.03 12.802   10 4.0485 0.3198 14.462, 58.47 0.27
SARB/NachJ f 45.33 13.074   7 4.9417 0.2884 24.242, 66.67 0.98
SARB/NachJ m 48.453 7.8802   11 2.376 0.1626 38.328, 66.36 1.14
SARC/NachJ f 39.36 15.713   19 3.6049 0.3992 6.3745, 58.82 0.22
SARC/NachJ m 42.796 12.746   17 3.0914 0.2978 9.009, 57.65 0.56
TUCB/NachJ f 20.646 9.4961   7 3.5892 0.46 5.8065, 36.996 -2.18
TUCB/NachJ m 18.308 3.3034   3 1.9072 0.1804 14.754, 21.285 -1.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 38.2780909091 3.5458911842 45.2715369658 31.2846448524
129S1/SvImJ 2 39.9134 3.7189620486 47.2481881035 32.5786118965
A/J 1 47.4418 5.2594065671 57.814756813 37.068843187
A/J 2 44.3268 5.2594065671 54.699756813 33.953843187
BALB/cJ 1 38.41545 2.6297032836 43.6019284065 33.2289715935
BALB/cJ 2 34.13425 3.3949323409 40.8299648313 27.4385351687
BTBR T+ Itpr3tf/J 1 42.1722 3.7189620486 49.5069881035 34.8374118965
BTBR T+ Itpr3tf/J 2 39.5992666667 3.0365197973 45.588096075 33.6104372584
C3H/HeJ 1 31.30025 5.8801953027 42.8975682808 19.7029317192
C3H/HeJ 2 40.0297 3.7189620486 47.3644881035 32.6949118965
C57BL/6J 1 20.6455 4.4450098376 29.4122485847 11.8787514153
C57BL/6J 2 18.3076666667 6.7898646818 31.6990963293 4.9162370041
CAST/EiJ 1 32.468 6.7898646818 45.8594296626 19.0765703374
CAST/EiJ 2 22.6865 8.3158519465 39.0875847999 6.2854152001
DBA/2J 1 45.3302857143 4.4450098376 54.0970342989 36.5635371296
DBA/2J 2 48.4529090909 3.5458911842 55.4463551476 41.4594630342
FVB/NJ 1 39.3600789474 2.6980186414 44.681293516 34.0388643787
FVB/NJ 2 42.7964705882 2.8523136862 48.4219962642 37.1709449123
LP/J 1 41.0808095238 2.5663276263 46.1422941791 36.0193248685
LP/J 2 43.6014090909 2.5073237017 48.5465222215 38.6562959604


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 39.0957454545 2.5692422526 44.1629785326 34.0285123765
A/J both 45.8843 3.7189620486 53.2190881035 38.5495118965
BALB/cJ both 36.27485 2.1471437399 40.509591886 32.040108114
BTBR T+ Itpr3tf/J both 40.8857333333 2.4005796799 45.6203186954 36.1511479712
C3H/HeJ both 35.664975 3.4787704551 42.5260410219 28.8039089781
C57BL/6J both 19.4765833333 4.0577202606 27.4794932597 11.473673407
CAST/EiJ both 27.57725 5.3678593497 38.1641047149 16.9903952851
DBA/2J both 46.8915974026 2.8430378447 52.4988286377 41.2843661675
FVB/NJ both 41.0782747678 1.9630969126 44.9500270719 37.2065224637
LP/J both 42.3411093074 1.7939279271 45.8792151138 38.8030035009




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA