Project measure / variable:   Project1194   lightdark_rest_time__whole_body__light__pct_total

ID, description, units MPD:129891   lightdark_rest_time__whole_body__light__pct_total   lightdark_rest_time__whole_body__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_rest_time__whole_body__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means41.798   None 41.728   None
Median of the strain means43.679   None 43.028   None
SD of the strain means± 9.508 ± 7.0385
Coefficient of variation (CV)0.2275 0.1687
Min–max range of strain means23.243   –   56.37   None 28.3   –   53.16   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 85.3509 85.3509 0.3623 0.5479
strain 9 4944.7116 549.4124 2.3323 0.0162
sex:strain 9 2694.8738 299.4304 1.2711 0.2548
Residuals 194 45700.1297 235.5677


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 34.678 17.279   21 3.7706 0.4983 11.427, 66.52 -0.75
C57BL/6J m 43.949 20.813   22 4.4373 0.4736 5.696, 82.92 0.32
GAIA/NachJ f 48.182 10.764   10 3.4039 0.2234 28.26, 64.14 0.67
GAIA/NachJ m 45.957 7.7419   15 1.999 0.1685 28.934, 55.86 0.6
GAIC/NachJ f 23.243 8.7547   3 5.0545 0.3767 17.574, 33.326 -1.95
GAIC/NachJ m 34.972 6.8809   2   4.8655 0.1968 30.107, 39.838 -0.96
MANB/NachJ f 46.245 15.317   11 4.6184 0.3312 24.399, 76.89 0.47
MANB/NachJ m 42.108 13.001   10 4.1113 0.3088 21.734, 57.7 0.05
MANE/NachJ f 56.37 6.7189   5 3.0048 0.1192 48.094, 65.56 1.53
MANE/NachJ m 53.16 14.304   5 6.3971 0.2691 36.746, 69.64 1.62
MANF/NachJ f 48.194 8.437   20 1.8866 0.1751 33.448, 67.37 0.67
MANF/NachJ m 37.471 11.746   12 3.3907 0.3135 18.234, 58.62 -0.6
SARA/NachJ f 46.972 17.816   4 8.908 0.3793 29.591, 71.27 0.54
SARA/NachJ m 44.624 16.484   10 5.2126 0.3694 14.886, 63.37 0.41
SARB/NachJ f 41.113 15.825   7 5.9811 0.3849 22.965, 71.64 -0.07
SARB/NachJ m 39.223 10.311   11 3.1087 0.2629 24.918, 57.76 -0.36
SARC/NachJ f 39.756 19.977   19 4.5831 0.5025 0.71106, 76.71 -0.21
SARC/NachJ m 47.514 19.606   17 4.7551 0.4126 1.7556, 69.27 0.82
TUCB/NachJ f 33.228 14.539   7 5.4954 0.4376 11.874, 50.35 -0.9
TUCB/NachJ m 28.3 11.139   3 6.431 0.3936 15.912, 37.49 -1.91


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 46.2450909091 4.6276606995 55.3720758586 37.1181059596
129S1/SvImJ 2 42.1083 4.853531488 51.6807625722 32.5358374278
A/J 1 56.3748 6.8639300558 69.9123063949 42.8372936051
A/J 2 53.1552 6.8639300558 66.6927063949 39.6176936051
BALB/cJ 1 48.19415 3.4319650279 54.9629031974 41.4253968026
BALB/cJ 2 37.4710833333 4.4306477992 46.2095061361 28.7326605306
BTBR T+ Itpr3tf/J 1 48.1824 4.853531488 57.7548625722 38.6099374278
BTBR T+ Itpr3tf/J 2 45.9574 3.9628918654 53.7732829612 38.1415170388
C3H/HeJ 1 46.9725 7.6741070987 62.1078922724 31.8371077276
C3H/HeJ 2 44.624 4.853531488 54.1964625722 35.0515374278
C57BL/6J 1 33.2278571429 5.8010796908 44.6691382709 21.7865760148
C57BL/6J 2 28.3 8.8612955985 45.7768456055 10.8231543945
CAST/EiJ 1 23.243 8.8612955985 40.7198456055 5.7661543945
CAST/EiJ 2 34.9725 10.8528263381 56.3771770235 13.5678229765
DBA/2J 1 41.1128571429 5.8010796908 52.5541382709 29.6715760148
DBA/2J 2 39.2234545455 4.6276606995 48.350439495 30.0964695959
FVB/NJ 1 39.7562873684 3.5211218237 46.7008816196 32.8116931172
FVB/NJ 2 47.5142294118 3.7224887236 54.8559730617 40.1724857619
LP/J 1 34.6778571429 3.3492549211 41.283483882 28.0722304037
LP/J 2 43.9489090909 3.2722502617 50.4026620405 37.4951561413


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 44.1766954545 3.3530587325 50.7898243276 37.5635665815
A/J both 54.765 4.853531488 64.3374625722 45.1925374278
BALB/cJ both 42.8326166667 2.8021877111 48.3592805095 37.3059528238
BTBR T+ Itpr3tf/J both 47.0699 3.1329411039 53.2488980207 40.8909019793
C3H/HeJ both 45.79825 4.540062986 54.7524688232 36.8440311768
C57BL/6J both 30.7639285714 5.2956370075 41.2083415057 20.3195156371
CAST/EiJ both 29.10775 7.0054692778 42.9244096071 15.2910903929
DBA/2J both 40.1681558442 3.7103830371 47.4860238417 32.8502878466
FVB/NJ both 43.6352583901 2.561992447 48.6881929121 38.5823238681
LP/J both 39.3133831169 2.3412139106 43.9308832996 34.6958829341




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA