Project measure / variable:   Project1194   lightdark_movement_episode_count__query__light__pct_total

ID, description, units MPD:129878   lightdark_movement_episode_count__query__light__pct_total   lightdark_movement_episode_count__query__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_movement_episode_count__query__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means52.35   None 52.92   None
Median of the strain means53.55   None 53.17   None
SD of the strain means± 5.0982 ± 4.3821
Coefficient of variation (CV)0.0974 0.0828
Min–max range of strain means43.191   –   57.87   None 45.492   –   58.48   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 103.9701 103.9701 1.5269 0.2181
strain 9 1971.6316 219.0702 3.2172 0.0012
sex:strain 9 889.4596 98.8288 1.4514 0.1687
Residuals 194 13210.273 68.0942


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 49.567 10.1   21 2.2041 0.2038 30.827, 63.48 -0.55
C57BL/6J m 54.9 9.5744   22 2.0413 0.1744 36.025, 71.31 0.45
GAIA/NachJ f 57.04 3.968   10 1.2548 0.0696 51.96, 63.19 0.92
GAIA/NachJ m 58.48 4.9287   15 1.2726 0.0843 49.774, 66.1 1.27
GAIC/NachJ f 43.191 7.7539   3 4.4767 0.1795 34.356, 48.864 -1.8
GAIC/NachJ m 51.2 6.8886   2   4.871 0.1345 46.328, 56.07 -0.39
MANB/NachJ f 55.56 5.1315   11 1.5472 0.0924 46.961, 63.16 0.63
MANB/NachJ m 51.44 9.6413   10 3.0488 0.1874 38.068, 66.24 -0.34
MANE/NachJ f 56.79 5.3622   5 2.398 0.0944 48.585, 62.38 0.87
MANE/NachJ m 57.1 3.2239   5 1.4418 0.0565 52.73, 61.19 0.95
MANF/NachJ f 54.05 6.0525   20 1.3534 0.112 42.123, 70.71 0.33
MANF/NachJ m 48.198 8.1968   12 2.3662 0.1701 32.836, 60.34 -1.08
SARA/NachJ f 57.87 8.2555   4 4.1278 0.1427 47.739, 67.92 1.08
SARA/NachJ m 57.7 8.3792   10 2.6497 0.1452 45.098, 68.02 1.09
SARB/NachJ f 53.06 9.1464   7 3.457 0.1724 41.892, 64.71 0.14
SARB/NachJ m 49.671 6.8487   11 2.065 0.1379 36.885, 58.14 -0.74
SARC/NachJ f 51.47 7.2349   19 1.6598 0.1406 37.433, 65.26 -0.17
SARC/NachJ m 55.04 12.62   17 3.0609 0.2293 14.516, 65.9 0.48
TUCB/NachJ f 44.891 9.6404   7 3.6437 0.2148 26.471, 53.99 -1.46
TUCB/NachJ m 45.492 4.9153   3 2.8378 0.108 40.476, 50.3 -1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 55.5619090909 2.4880476216 60.4690046346 50.6548135473
129S1/SvImJ 2 51.4392 2.6094863602 56.585805225 46.292594775
A/J 1 56.787 3.6903710015 64.0653989094 49.5086010906
A/J 2 57.098 3.6903710015 64.3763989094 49.8196010906
BALB/cJ 1 54.0547 1.8451855007 57.6938994547 50.4155005453
BALB/cJ 2 48.1984166667 2.3821242383 52.8966029605 43.5002303728
BTBR T+ Itpr3tf/J 1 57.038 2.6094863602 62.184605225 51.891394775
BTBR T+ Itpr3tf/J 2 58.4802666667 2.1306366911 62.6824522363 54.2780810971
C3H/HeJ 1 57.86975 4.1259602107 66.0072473643 49.7322526357
C3H/HeJ 2 57.7047 2.6094863602 62.851305225 52.558094775
C57BL/6J 1 44.8908571429 3.1189327534 51.0422269487 38.739487337
C57BL/6J 2 45.4916666667 4.7642484767 54.8880392543 36.095294079
CAST/EiJ 1 43.1913333333 4.7642484767 52.587705921 33.7949607457
CAST/EiJ 2 51.199 5.8349888878 62.7071591364 39.6908408636
DBA/2J 1 53.0572857143 3.1189327534 59.2086555201 46.9059159084
DBA/2J 2 49.6708181818 2.4880476216 54.5779137255 44.7637226382
FVB/NJ 1 51.4704210526 1.8931203793 55.2041609121 47.7366811932
FVB/NJ 2 55.0365294118 2.0013846772 58.9837954308 51.0892633928
LP/J 1 49.5666666667 1.8007166648 53.11816168 46.0151716534
LP/J 2 54.9042727273 1.7593153452 58.3741132621 51.4344321924


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 53.5005545455 1.8027617724 57.0560830581 49.9450260328
A/J both 56.9425 2.6094863602 62.089105225 51.795894775
BALB/cJ both 51.1265583333 1.5065876525 54.0979522454 48.1551644213
BTBR T+ Itpr3tf/J both 57.7591333333 1.6844162026 61.081252721 54.4370139457
C3H/HeJ both 57.787225 2.4409509789 62.6014333642 52.9730166358
C57BL/6J both 45.1912619048 2.8471830406 50.8066685751 39.5758552344
CAST/EiJ both 47.1951666667 3.7664691313 54.6236514468 39.7666818865
DBA/2J both 51.3640519481 1.9948760919 55.2984812956 47.4296226005
FVB/NJ both 53.2534752322 1.3774474034 55.9701700238 50.5367804406
LP/J both 52.235469697 1.2587464986 54.7180545478 49.7528848461




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA