Project measure / variable:   Project1194   lightdark_duration__whole_body__light__pct_total

ID, description, units MPD:129863   lightdark_duration__whole_body__light__pct_total   lightdark_duration__whole_body__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_duration__whole_body__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means45.719   None 45.531   None
Median of the strain means46.085   None 47.76   None
SD of the strain means± 6.2407 ± 6.852
Coefficient of variation (CV)0.1365 0.1505
Min–max range of strain means33.169   –   53.25   None 28.496   –   52.11   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 57.2101 57.2101 0.4584 0.4992
strain 9 3356.3937 372.9326 2.9879 0.0023
sex:strain 9 1155.592 128.3991 1.0287 0.4185
Residuals 194 24213.7546 124.8132


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 44.265 9.5585   21 2.0858 0.2159 24.093, 61.45 -0.23
C57BL/6J m 49.21 13.264   22 2.8278 0.2695 23.791, 68.6 0.54
GAIA/NachJ f 53.25 8.0779   10 2.5545 0.1517 40.897, 62.15 1.21
GAIA/NachJ m 48.612 4.1876   15 1.0812 0.0861 40.061, 54.54 0.45
GAIC/NachJ f 38.4 12.239   3 7.0661 0.3187 26.606, 51.04 -1.17
GAIC/NachJ m 41.712 5.7622   2   4.0745 0.1381 37.637, 45.786 -0.56
MANB/NachJ f 47.842 10.337   11 3.1166 0.2161 28.298, 64.3 0.34
MANB/NachJ m 46.914 9.6263   10 3.0441 0.2052 25.558, 58.86 0.2
MANE/NachJ f 51.63 4.0671   5 1.8189 0.0788 45.752, 55.57 0.95
MANE/NachJ m 50.68 8.1686   5 3.6531 0.1612 42.255, 60.88 0.75
MANF/NachJ f 50.19 5.8175   20 1.3008 0.1159 39.295, 62.98 0.72
MANF/NachJ m 42.055 7.6485   12 2.2079 0.1819 31.346, 54.28 -0.51
SARA/NachJ f 44.329 6.5369   4 3.2685 0.1475 39.58, 53.75 -0.22
SARA/NachJ m 47.045 11.664   10 3.6886 0.2479 23.569, 59.35 0.22
SARB/NachJ f 49.856 10.607   7 4.0092 0.2128 33.093, 66.79 0.66
SARB/NachJ m 52.11 3.7023   11 1.1163 0.071 47.34, 60.47 0.96
SARC/NachJ f 44.26 18.717   19 4.2939 0.4229 2.3031, 62.52 -0.23
SARC/NachJ m 48.475 16.483   17 3.9976 0.34 5.6663, 64.41 0.43
TUCB/NachJ f 33.169 10.991   7 4.1542 0.3314 15.85, 47.113 -2.01
TUCB/NachJ m 28.496 15.205   3 8.7786 0.5336 11.0, 38.516 -2.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 47.8419090909 3.368479131 54.4854511152 41.1983670667
129S1/SvImJ 2 46.9142 3.5328907175 53.8820056582 39.9463943418
A/J 1 51.6264 4.996261967 61.4803652618 41.7724347382
A/J 2 50.678 4.996261967 60.5319652618 40.8240347382
BALB/cJ 1 50.19255 2.4981309835 55.1195326309 45.2655673691
BALB/cJ 2 42.0549166667 3.2250732319 48.4156238922 35.6942094411
BTBR T+ Itpr3tf/J 1 53.2519 3.5328907175 60.2197056582 46.2840943418
BTBR T+ Itpr3tf/J 2 48.6124666667 2.8845931916 54.3016561632 42.9232771702
C3H/HeJ 1 44.329 5.5859906958 55.3460680867 33.3119319133
C3H/HeJ 2 47.0447 3.5328907175 54.0125056582 40.0768943418
C57BL/6J 1 33.169 4.2226120592 41.497120667 24.840879333
C57BL/6J 2 28.4956666667 6.4501464639 41.2170811177 15.7742522156
CAST/EiJ 1 38.4003333333 6.4501464639 51.1217477844 25.6789188823
CAST/EiJ 2 41.7115 7.8997838013 57.2919871058 26.1310128942
DBA/2J 1 49.8555714286 4.2226120592 58.1836920956 41.5274507616
DBA/2J 2 52.1092727273 3.368479131 58.7528147515 45.465730703
FVB/NJ 1 44.2604842105 2.5630283098 49.315461731 39.2055066901
FVB/NJ 2 48.4748294118 2.7096034897 53.8188924007 43.1307664228
LP/J 1 44.2652857143 2.437926209 49.0735284232 39.4570430054
LP/J 2 49.2095909091 2.3818744358 53.9072845255 44.5118972926


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 47.3780545455 2.4406950075 52.1917580656 42.5643510253
A/J both 51.1522 3.5328907175 58.1200056582 44.1843943418
BALB/cJ both 46.1237333333 2.0397154067 50.1465978058 42.1008688609
BTBR T+ Itpr3tf/J both 50.9321833333 2.2804711521 55.4298825457 46.434484121
C3H/HeJ both 45.68685 3.3047166624 52.2046353777 39.1690646223
C57BL/6J both 30.8323333333 3.854699794 38.4348325849 23.2298340818
CAST/EiJ both 40.0559166667 5.0992885169 50.1130778478 29.9987554856
DBA/2J both 50.9824220779 2.7007917477 56.3091059542 45.6557382016
FVB/NJ both 46.3676568111 1.8648770193 50.0456932085 42.6896204138
LP/J both 46.7374383117 1.7041720885 50.0985215917 43.3763550316




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA