Project measure / variable:   Project1194   lightdark_ambulatory_time__whole_body__light__pct_total

ID, description, units MPD:129851   lightdark_ambulatory_time__whole_body__light__pct_total   lightdark_ambulatory_time__whole_body__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_ambulatory_time__whole_body__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means50.83   None 49.638   None
Median of the strain means49.486   None 50.15   None
SD of the strain means± 4.788 ± 6.3057
Coefficient of variation (CV)0.0942 0.127
Min–max range of strain means42.748   –   57.95   None 33.774   –   57.43   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.9836 2.9836 0.0286 0.8659
strain 9 3070.0222 341.1136 3.268 0.001
sex:strain 9 740.3332 82.2592 0.7881 0.6277
Residuals 194 20249.8657 104.3808


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 48.792 6.7603   21 1.4752 0.1386 35.697, 62.37 -0.42
C57BL/6J m 50.46 11.562   22 2.465 0.2291 29.762, 66.02 0.13
GAIA/NachJ f 57.95 4.4035   10 1.3925 0.076 49.353, 63.47 1.49
GAIA/NachJ m 55.01 6.7953   15 1.7545 0.1235 48.164, 73.34 0.85
GAIC/NachJ f 47.854 7.0311   3 4.0594 0.1469 39.802, 52.78 -0.62
GAIC/NachJ m 48.62 2.46   2   1.7395 0.0506 46.881, 50.36 -0.16
MANB/NachJ f 50.18 10.545   11 3.1794 0.2102 29.336, 61.05 -0.13
MANB/NachJ m 51.08 7.7206   10 2.4415 0.1511 34.826, 61.36 0.23
MANE/NachJ f 53.91 5.5331   5 2.4745 0.1026 46.199, 60.79 0.64
MANE/NachJ m 52.91 5.382   5 2.4069 0.1017 47.634, 59.73 0.52
MANF/NachJ f 56.36 4.997   20 1.1174 0.0887 49.307, 64.2 1.16
MANF/NachJ m 48.537 6.9967   12 2.0198 0.1442 36.669, 58.6 -0.17
SARA/NachJ f 47.418 4.6892   4 2.3446 0.0989 40.798, 51.49 -0.71
SARA/NachJ m 48.709 10.325   10 3.265 0.212 26.224, 61.95 -0.15
SARB/NachJ f 55.0 9.3166   7 3.5213 0.1694 42.263, 69.85 0.87
SARB/NachJ m 57.43 5.288   11 1.5944 0.0921 50.13, 66.39 1.24
SARC/NachJ f 48.041 18.97   19 4.352 0.3949 4.7812, 65.75 -0.58
SARC/NachJ m 49.846 13.958   17 3.3853 0.28 15.159, 61.33 0.03
TUCB/NachJ f 42.748 9.6828   7 3.6598 0.2265 27.502, 56.76 -1.69
TUCB/NachJ m 33.774 18.975   3 10.955 0.5618 12.629, 49.316 -2.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 50.1763636364 3.0804478855 56.2518309867 44.100896286
129S1/SvImJ 2 51.0803 3.2308009986 57.4523039138 44.7082960862
A/J 1 53.9138 4.5690425896 62.9251743544 44.9024256456
A/J 2 52.9062 4.5690425896 61.9175743544 43.8948256456
BALB/cJ 1 56.36465 2.2845212948 60.8703371772 51.8589628228
BALB/cJ 2 48.53725 2.9493043096 54.3540671335 42.7204328665
BTBR T+ Itpr3tf/J 1 57.9503 3.2308009986 64.3223039138 51.5782960862
BTBR T+ Itpr3tf/J 2 55.0053333333 2.637937969 60.2080527426 49.802613924
C3H/HeJ 1 47.4175 5.1083449112 57.4925228136 37.3424771864
C3H/HeJ 2 48.7092 3.2308009986 55.0812039138 42.3371960862
C57BL/6J 1 42.7482857143 3.8615457846 50.3642870909 35.1322843377
C57BL/6J 2 33.7743333333 5.8986086192 45.4079676004 22.1406990663
CAST/EiJ 1 47.854 5.8986086192 59.4876342671 36.2203657329
CAST/EiJ 2 48.6205 7.2242906547 62.8687339042 34.3722660958
DBA/2J 1 54.9954285714 3.8615457846 62.611429948 47.3794271948
DBA/2J 2 57.4345454545 3.0804478855 63.5100128049 51.3590781042
FVB/NJ 1 48.0405947368 2.3438693933 52.6633322419 43.4178572318
FVB/NJ 2 49.8455294118 2.4779112519 54.7326333225 44.9584255011
LP/J 1 48.7924285714 2.2294644982 53.1895290164 44.3953281265
LP/J 2 50.4643636364 2.1782055889 54.7603677987 46.168359474


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 50.6283318182 2.2319965428 55.0304261323 46.226237504
A/J both 53.41 3.2308009986 59.7820039138 47.0379960862
BALB/cJ both 52.45095 1.8653038263 56.1298281749 48.7720718251
BTBR T+ Itpr3tf/J both 56.4778166667 2.0854730771 60.5909275067 52.3647058266
C3H/HeJ both 48.06335 3.0221376054 54.0238138782 42.1028861218
C57BL/6J both 38.2613095238 3.5250928885 45.2137357771 31.3088832706
CAST/EiJ both 48.23725 4.6632595656 57.4344454373 39.0400545627
DBA/2J both 56.214987013 2.4698529826 61.0861978608 51.3437761652
FVB/NJ both 48.9430620743 1.7054154849 52.3065976648 45.5795264838
LP/J both 49.6283961039 1.5584520795 52.7020805414 46.5547116664




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA