Project measure / variable:   Project1194   lightdark_stereotypic_activity_count__whole_body__total_

ID, description, units MPD:129803   lightdark_stereotypic_activity_count__whole_body__total_   lightdark_stereotypic_activity_count__whole_body__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_activity_count__whole_body__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means120.1   None 116.3   None
Median of the strain means120.1   None 116.0   None
SD of the strain means± 17.009 ± 13.084
Coefficient of variation (CV)0.1417 0.1125
Min–max range of strain means98.45   –   141.5   None 97.56   –   139.6   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 44.1488 44.1488 0.0995 0.7528
strain 9 29486.0657 3276.2295 7.3838 < 0.0001
sex:strain 9 4502.6663 500.2963 1.1275 0.345
Residuals 194 86079.1974 443.7072


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 108.4 20.049   21 4.3751 0.185 70.5, 155.5 -0.68
C57BL/6J m 107.9 15.14   22 3.2279 0.1403 77.0, 144.0 -0.64
GAIA/NachJ f 133.5 29.869   10 9.4455 0.2237 93.0, 180.0 0.79
GAIA/NachJ m 126.1 30.202   15 7.7981 0.2394 79.5, 183.0 0.75
GAIC/NachJ f 141.5 6.0828   3 3.5119 0.043 137.5, 148.5 1.26
GAIC/NachJ m 120.2 13.789   2   9.75 0.1147 110.5, 130.0 0.3
MANB/NachJ f 98.45 21.172   11 6.3837 0.215 67.5, 138.0 -1.27
MANB/NachJ m 104.5 16.764   10 5.3012 0.1605 82.5, 142.0 -0.9
MANE/NachJ f 141.4 15.606   5 6.9793 0.1104 117.5, 157.5 1.26
MANE/NachJ m 139.6 15.278   5 6.8326 0.1094 126.5, 165.0 1.78
MANF/NachJ f 112.0 22.333   20 4.9937 0.1994 81.0, 154.0 -0.47
MANF/NachJ m 111.8 13.434   12 3.878 0.1201 87.0, 134.5 -0.35
SARA/NachJ f 99.25 12.176   4 6.0879 0.1227 86.0, 115.0 -1.22
SARA/NachJ m 122.5 22.644   10 7.1606 0.1849 86.5, 153.0 0.47
SARB/NachJ f 128.2 33.102   7 12.511 0.2582 97.0, 183.0 0.48
SARB/NachJ m 128.1 26.221   11 7.9059 0.2047 92.5, 181.5 0.9
SARC/NachJ f 105.9 15.158   19 3.4776 0.1431 62.0, 133.5 -0.83
SARC/NachJ m 97.56 19.958   17 4.8404 0.2046 55.5, 126.0 -1.43
TUCB/NachJ f 131.9 17.674   7 6.6801 0.134 109.5, 155.0 0.7
TUCB/NachJ m 105.0 21.077   3 12.169 0.2007 81.0, 120.5 -0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 98.4545454545 6.351143084 110.9806987538 85.9283921552
129S1/SvImJ 2 104.45 6.6611350625 117.5875404138 91.3124595862
A/J 1 141.4 9.4202675461 159.9792878295 122.8207121705
A/J 2 139.6 9.4202675461 158.1792878295 121.0207121705
BALB/cJ 1 111.985 4.7101337731 121.2746439147 102.6953560853
BALB/cJ 2 111.8333333333 6.0807565538 123.826212058 99.8404546087
BTBR T+ Itpr3tf/J 1 133.5 6.6611350625 146.6375404138 120.3624595862
BTBR T+ Itpr3tf/J 2 126.1333333333 5.4387940036 136.860090163 115.4065765036
C3H/HeJ 1 99.25 10.5321792997 120.0222752801 78.4777247199
C3H/HeJ 2 122.45 6.6611350625 135.5875404138 109.3124595862
C57BL/6J 1 131.9285714286 7.9615791973 147.6309355875 116.2262072697
C57BL/6J 2 105.0 12.1615131077 128.9857574493 81.0142425507
CAST/EiJ 1 141.5 12.1615131077 165.4857574493 117.5142425507
CAST/EiJ 2 120.25 14.894750807 149.6264334225 90.8735665775
DBA/2J 1 128.2142857143 7.9615791973 143.9166498732 112.5119215554
DBA/2J 2 128.0909090909 6.351143084 140.6170623902 115.5647557916
FVB/NJ 1 105.9473684211 4.8324952866 115.4783419762 96.416394866
FVB/NJ 2 97.5588235294 5.1088573789 107.6348570664 87.4827899924
LP/J 1 108.3571428571 4.5966198927 117.4229070312 99.2913786831
LP/J 2 107.9318181818 4.490936343 116.7891461219 99.0744902417


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 101.4522727273 4.6018403599 110.5283330593 92.3762123952
A/J both 140.5 6.6611350625 153.6375404138 127.3624595862
BALB/cJ both 111.9091666667 3.8458081214 119.4941291611 104.3242041722
BTBR T+ Itpr3tf/J both 129.8166666667 4.299744194 138.2969125388 121.3364207945
C3H/HeJ both 110.85 6.2309213027 123.1390437834 98.5609562166
C57BL/6J both 118.4642857143 7.2678941995 132.7985174743 104.1300539543
CAST/EiJ both 130.875 9.6145203036 149.837406236 111.912593764
DBA/2J both 128.1525974026 5.0922431646 138.1958632641 118.1093315411
FVB/NJ both 101.7530959752 3.5161567945 108.6878978604 94.8182940901
LP/J both 108.1444805195 3.2131535784 114.4816789995 101.8072820395




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA