Project measure / variable:   Project1194   lightdark_clockwise_revolutions__crossover__total_

ID, description, units MPD:129761   lightdark_clockwise_revolutions__crossover__total_   lightdark_clockwise_revolutions__crossover__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - lightdark_clockwise_revolutions__crossover__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means5.2947   None 4.4991   None
Median of the strain means5.3277   None 4.8273   None
SD of the strain means± 1.7426 ± 1.2827
Coefficient of variation (CV)0.3291 0.2851
Min–max range of strain means2.5476   –   8.875   None 2.0   –   5.75   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.785 4.785 1.1226 0.2907
strain 9 292.4991 32.4999 7.6244 < 0.0001
sex:strain 9 76.7219 8.5247 1.9999 0.0412
Residuals 194 826.9426 4.2626


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 2.5476 0.97346   21 0.21243 0.3821 1.0, 4.0 -1.58
C57BL/6J m 2.6591 1.209   22 0.25775 0.4547 1.0, 5.0 -1.43
GAIA/NachJ f 5.55 2.0474   10 0.64743 0.3689 4.0, 9.5 0.15
GAIA/NachJ m 5.5 2.4054   15 0.62106 0.4373 2.0, 9.0 0.78
GAIC/NachJ f 5.8333 1.1547   3 0.66667 0.1979 4.5, 6.5 0.31
GAIC/NachJ m 5.75 4.5962   2   3.25 0.7993 2.5, 9.0 0.98
MANB/NachJ f 6.1818 1.5374   11 0.46355 0.2487 4.0, 8.5 0.51
MANB/NachJ m 5.7 2.1628   10 0.68394 0.3794 2.5, 9.0 0.94
MANE/NachJ f 6.4 1.2942   5 0.57879 0.2022 5.0, 8.0 0.63
MANE/NachJ m 5.2 2.4135   5 1.0794 0.4641 1.5, 8.0 0.55
MANF/NachJ f 4.525 1.902   20 0.42531 0.4203 1.0, 7.5 -0.44
MANF/NachJ m 4.2917 1.5588   12 0.44999 0.3632 1.0, 6.5 -0.16
SARA/NachJ f 8.875 5.2182   4 2.6091 0.588 2.0, 14.5 2.05
SARA/NachJ m 4.2 1.7512   10 0.55377 0.417 2.0, 8.5 -0.23
SARB/NachJ f 3.5 0.76376   7 0.28868 0.2182 2.5, 4.5 -1.03
SARB/NachJ m 4.4545 1.7529   11 0.52853 0.3935 1.5, 7.0 -0.03
SARC/NachJ f 5.1053 2.2084   19 0.50665 0.4326 1.5, 10.0 -0.11
SARC/NachJ m 5.2353 3.336   17 0.80909 0.6372 0.5, 12.5 0.57
TUCB/NachJ f 4.4286 2.1492   7 0.81232 0.4853 2.0, 8.5 -0.5
TUCB/NachJ m 2.0 1.8028   3 1.0408 0.9014 -1.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 6.1818181818 0.6225016101 7.4095578965 4.9540784671
129S1/SvImJ 2 5.7 0.6528851967 6.987664276 4.412335724
A/J 1 6.4 0.9233190999 8.2210322829 4.5789677171
A/J 2 5.2 0.9233190999 7.0210322829 3.3789677171
BALB/cJ 1 4.525 0.4616595499 5.4355161415 3.6144838585
BALB/cJ 2 4.2916666667 0.5959999162 5.4671379508 3.1161953826
BTBR T+ Itpr3tf/J 1 5.55 0.6528851967 6.837664276 4.262335724
BTBR T+ Itpr3tf/J 2 5.5 0.5330785309 6.5513734787 4.4486265213
C3H/HeJ 1 8.875 1.0323021361 10.9109759869 6.8390240131
C3H/HeJ 2 4.2 0.6528851967 5.487664276 2.912335724
C57BL/6J 1 4.4285714286 0.7803470657 5.9676246105 2.8895182467
C57BL/6J 2 2.0 1.1919998324 4.3509425682 -0.3509425682
CAST/EiJ 1 5.8333333333 1.1919998324 8.1842759015 3.4823907651
CAST/EiJ 2 5.75 1.4598956814 8.6293048533 2.8706951467
DBA/2J 1 3.5 0.7803470657 5.0390531819 1.9609468181
DBA/2J 2 4.4545454545 0.6225016101 5.6822851692 3.2268057399
FVB/NJ 1 5.1052631579 0.4736527043 6.0394330082 4.1710933075
FVB/NJ 2 5.2352941176 0.5007400876 6.2228875347 4.2477007006
LP/J 1 2.5476190476 0.4505335885 3.4361918165 1.6590462788
LP/J 2 2.6590909091 0.4401751098 3.5272339869 1.7909478313


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.9409090909 0.4510452679 6.8304910285 5.0513271533
A/J both 5.8 0.6528851967 7.087664276 4.512335724
BALB/cJ both 4.4083333333 0.3769434441 5.1517666497 3.664900017
BTBR T+ Itpr3tf/J both 5.525 0.4214355823 6.3561837161 4.6938162839
C3H/HeJ both 6.5375 0.6107181798 7.7419996375 5.3330003625
C57BL/6J both 3.2142857143 0.712356151 4.6192426225 1.8093288061
CAST/EiJ both 5.7916666667 0.9423586102 7.6502499576 3.9330833757
DBA/2J both 3.9772727273 0.4991116603 4.9616544499 2.9928910046
FVB/NJ both 5.1702786378 0.344632964 5.8499870434 4.4905702321
LP/J both 2.6033549784 0.3149343748 3.2244898206 1.9822201361




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA