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Project measure / variable:   Project1194   lightdark_ambulatory_episode_count__whole_body__total_

ID, description, units MPD:129755   lightdark_ambulatory_episode_count__whole_body__total_   lightdark_ambulatory_episode_count__whole_body__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - lightdark_ambulatory_episode_count__whole_body__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means3.2643   None 3.1071   None
Median of the strain means3.1322   None 3.2709   None
SD of the strain means± 0.75767 ± 1.0363
Coefficient of variation (CV)0.2321 0.3335
Min–max range of strain means2.1   –   4.5   None 1.3182   –   4.6333   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.276 4.276 1.2528 0.2644
strain 9 101.5089 11.2788 3.3046 0.0009
sex:strain 9 54.7899 6.0878 1.7837 0.0734
Residuals 194 662.1276 3.413


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 2.8095 1.5123   21 0.33 0.5383 1.0, 7.0 -0.6
C57BL/6J m 2.1364 1.0256   22 0.21867 0.4801 0.5, 5.0 -0.94
GAIA/NachJ f 3.05 1.802   10 0.56984 0.5908 1.0, 7.5 -0.28
GAIA/NachJ m 4.6333 2.4674   15 0.63708 0.5325 1.5, 10.5 1.47
GAIC/NachJ f 4.5 1.7321   3 1.0 0.3849 3.5, 6.5 1.63
GAIC/NachJ m 3.25 1.7678   2   1.25 0.5439 2.0, 4.5 0.14
MANB/NachJ f 4.3182 4.3027   11 1.2973 0.9964 0.5, 16.0 1.39
MANB/NachJ m 2.45 0.76194   10 0.24095 0.311 1.5, 3.5 -0.63
MANE/NachJ f 2.1 0.54772   5 0.24495 0.2608 1.5, 3.0 -1.54
MANE/NachJ m 3.8 1.8574   5 0.83066 0.4888 2.5, 7.0 0.67
MANF/NachJ f 3.3875 1.8326   20 0.40978 0.541 0.5, 6.0 0.16
MANF/NachJ m 3.2917 1.3561   12 0.39147 0.412 0.5, 5.5 0.18
SARA/NachJ f 3.0 2.1602   4 1.0801 0.7201 -0.35
SARA/NachJ m 2.25 1.752   10 0.55403 0.7787 0.5, 5.5 -0.83
SARB/NachJ f 2.5 1.0801   7 0.40825 0.432 1.0, 3.5 -1.01
SARB/NachJ m 1.3182 0.78335   11 0.23619 0.5943 -1.73
SARC/NachJ f 3.7632 1.7027   19 0.39062 0.4525 1.5, 8.0 0.66
SARC/NachJ m 3.9412 1.7128   17 0.41542 0.4346 1.0, 7.5 0.8
TUCB/NachJ f 3.2143 1.7286   7 0.65335 0.5378 1.0, 6.0 -0.07
TUCB/NachJ m 4.0 2.1794   3 1.2583 0.5449 1.5, 5.5 0.86


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 4.3181818182 0.5570236396 5.4167814574 3.2195821789
129S1/SvImJ 2 2.45 0.5842113218 3.6022210222 1.2977789778
A/J 1 2.1 0.8261995746 3.7294865965 0.4705134035
A/J 2 3.8 0.8261995746 5.4294865965 2.1705134035
BALB/cJ 1 3.3875 0.4130997873 4.2022432983 2.5727567017
BALB/cJ 2 3.2916666667 0.5333095322 4.3434957419 2.2398375915
BTBR T+ Itpr3tf/J 1 3.05 0.5842113218 4.2022210222 1.8977789778
BTBR T+ Itpr3tf/J 2 4.6333333333 0.4770065468 5.5741178585 3.6925488082
C3H/HeJ 1 3.0 0.9237192059 4.8218213991 1.1781786009
C3H/HeJ 2 2.25 0.5842113218 3.4022210222 1.0977789778
C57BL/6J 1 3.2142857143 0.6982660858 4.5914532443 1.8371181842
C57BL/6J 2 4.0 1.0666190644 6.1036581504 1.8963418496
CAST/EiJ 1 4.5 1.0666190644 6.6036581504 2.3963418496
CAST/EiJ 2 3.25 1.3063362289 5.8264445308 0.6735554692
DBA/2J 1 2.5 0.6982660858 3.8771675301 1.1228324699
DBA/2J 2 1.3181818182 0.5570236396 2.4167814574 0.2195821789
FVB/NJ 1 3.7631578947 0.423831439 4.5990668812 2.9272489082
FVB/NJ 2 3.9411764706 0.4480696299 4.8248896541 3.0574632871
LP/J 1 2.8095238095 0.4031441126 3.6046318537 2.0144157653
LP/J 2 2.1363636364 0.3938751928 2.9131908911 1.3595363816


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.3840909091 0.4036019709 4.1801019724 2.5880798458
A/J both 2.95 0.5842113218 4.1022210222 1.7977789778
BALB/cJ both 3.3395833333 0.3372945639 4.0048184507 2.674348216
BTBR T+ Itpr3tf/J both 3.8416666667 0.3771067867 4.5854221384 3.097911195
C3H/HeJ both 2.625 0.546479652 3.7028040748 1.5471959252
C57BL/6J both 3.6071428571 0.6374268105 4.8643190599 2.3499666543
CAST/EiJ both 3.875 0.8432364098 5.5380877934 2.2119122066
DBA/2J both 1.9090909091 0.4466124891 2.7899302209 1.0282515972
FVB/NJ both 3.8521671827 0.3083826689 4.4603803082 3.2439540571
LP/J both 2.4729437229 0.2818079324 3.0287443584 1.9171430875




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA