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Project measure / variable:   Project1194   OF_vertical_episode_count__40_45min_

ID, description, units MPD:129432   OF_vertical_episode_count__40_45min_   OF_vertical_episode_count__40_45min_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - OF_vertical_episode_count__40_45min_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means27.181   None 22.086   None
Median of the strain means24.263   None 21.3   None
SD of the strain means± 11.251 ± 12.558
Coefficient of variation (CV)0.4139 0.5686
Min–max range of strain means14.0   –   51.33   None 1.0   –   40.125   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0068 0.0068 0.0001 0.9934
strain 9 16309.6538 1812.1838 18.3786 < 0.0001
sex:strain 9 2036.5135 226.2793 2.2948 0.0183
Residuals 183 18044.3776 98.6032


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 25.526 10.281   19 2.3587 0.4028 4.0, 41.0 -0.15
C57BL/6J m 29.706 10.896   17 2.6426 0.3668 11.0, 49.0 0.61
GAIA/NachJ f 18.2 9.2952   10 2.9394 0.5107 -0.8
GAIA/NachJ m 22.6 10.494   15 2.7094 0.4643 6.0, 40.0 0.04
GAIC/NachJ f 23.0 21.213   2   15.0 0.9223 8.0, 38.0 -0.37
GAIC/NachJ m 1.0 1.4142   2   1.0 1.4142 -1.68
MANB/NachJ f 23.0 11.719   10 3.7059 0.5095 -0.37
MANB/NachJ m 12.0 9.0079   8 3.1848 0.7507 -0.8
MANE/NachJ f 14.0 10.1   5 4.5166 0.7214 8.0, 32.0 -1.17
MANE/NachJ m 12.5 8.7121   6 3.5567 0.697 4.0, 27.0 -0.76
MANF/NachJ f 17.15 8.8095   20 1.9699 0.5137 7.0, 42.0 -0.89
MANF/NachJ m 20.0 6.9642   13 1.9315 0.3482 8.0, 32.0 -0.17
SARA/NachJ f 51.33 18.583   3 10.729 0.362 36.0, 72.0 2.15
SARA/NachJ m 40.125 9.3723   8 3.3136 0.2336 24.0, 53.0 1.44
SARB/NachJ f 31.75 6.4087   8 2.2658 0.2018 20.0, 40.0 0.41
SARB/NachJ m 28.455 12.25   11 3.6936 0.4305 0.51
SARC/NachJ f 39.0 5.8023   19 1.3311 0.1488 29.0, 50.0 1.05
SARC/NachJ m 39.471 9.375   17 2.2738 0.2375 25.0, 55.0 1.38
TUCB/NachJ f 28.857 16.487   7 6.2314 0.5713 9.0, 52.0 0.15
TUCB/NachJ m 15.0 6.5574   3 3.7859 0.4372 8.0, 21.0 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 23.0 3.1401139541 29.1954822464 16.8045177536
129S1/SvImJ 2 12.0 3.5107541293 18.9267597282 5.0732402718
A/J 1 14.0 4.4407917413 22.7617350183 5.2382649817
A/J 2 12.5 4.0538696832 20.4983331873 4.5016668127
BALB/cJ 1 17.15 2.2203958707 21.5308675091 12.7691324909
BALB/cJ 2 20.0 2.754062125 25.4337973877 14.5662026123
BTBR T+ Itpr3tf/J 1 18.2 3.1401139541 24.3954822464 12.0045177536
BTBR T+ Itpr3tf/J 2 22.6 2.5638923073 27.6585900714 17.5414099286
C3H/HeJ 1 51.3333333333 5.7330374861 62.6446846032 40.0219820634
C3H/HeJ 2 40.125 3.5107541293 47.0517597282 33.1982402718
C57BL/6J 1 28.8571428571 3.7531540345 36.2621604867 21.4521252276
C57BL/6J 2 15.0 5.7330374861 26.3113512699 3.6886487301
CAST/EiJ 1 23.0 7.0215082585 36.8535194563 9.1464805437
CAST/EiJ 2 1.0 7.0215082585 14.8535194563 -12.8535194563
DBA/2J 1 31.75 3.5107541293 38.6767597282 24.8232402718
DBA/2J 2 28.4545454545 2.9939811812 34.3617059988 22.5473849103
FVB/NJ 1 39.0 2.2780780964 43.4946752277 34.5053247723
FVB/NJ 2 39.4705882353 2.4083574638 44.2223062073 34.7188702633
LP/J 1 25.5263157895 2.2780780964 30.0209910172 21.0316405617
LP/J 2 29.7058823529 2.4083574638 34.4576003249 24.9541643809


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 17.5 2.3550854656 22.1466116848 12.8533883152
A/J both 13.25 3.0064302211 19.1817226483 7.3182773517
BALB/cJ both 18.575 1.7688284266 22.0649195615 15.0850804385
BTBR T+ Itpr3tf/J both 20.4 2.0269348416 24.3991665937 16.4008334063
C3H/HeJ both 45.7291666667 3.361291172 52.3610341993 39.097299134
C57BL/6J both 21.9285714286 3.4261452109 28.6883967526 15.1687461046
CAST/EiJ both 12.0 4.9649561038 21.7959175509 2.2040824491
DBA/2J both 30.1022727273 2.3070174398 34.6540456244 25.5504998302
FVB/NJ both 39.2352941176 1.6575452849 42.5056507147 35.9649375206
LP/J both 27.6160990712 1.6575452849 30.8864556683 24.3457424741




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA