Project measure / variable:   Project1194   OF_vertical_activity_time__35_40min__s

ID, description, units MPD:129400   OF_vertical_activity_time__35_40min__s   OF_vertical_activity_time__35_40min__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - OF_vertical_activity_time__35_40min__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means19.433   None 20.035   None
Median of the strain means13.397   None 16.865   None
SD of the strain means± 13.893 ± 15.717
Coefficient of variation (CV)0.7149 0.7845
Min–max range of strain means1.75   –   44.857   None 4.165   –   52.59   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1421.159 1421.159 6.5974 0.011
strain 9 34439.7408 3826.6379 17.7643 < 0.0001
sex:strain 9 2555.5067 283.9452 1.3182 0.23
Residuals 183 39420.2657 215.4113


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 13.573 5.8227   19 1.3358 0.429 7.23, 30.45 -0.42
C57BL/6J m 19.131 8.7088   17 2.1122 0.4552 4.68, 35.82 -0.06
GAIA/NachJ f 13.221 6.6379   10 2.0991 0.5021 5.47, 25.85 -0.45
GAIA/NachJ m 18.723 9.0305   15 2.3317 0.4823 6.16, 42.54 -0.08
GAIC/NachJ f 1.75 0.08485   2   0.06 0.0485 1.69, 1.81 -1.27
GAIC/NachJ m 4.165 5.0558   2   3.575 1.2139 0.59, 7.74 -1.01
MANB/NachJ f 12.091 9.2051   10 2.9109 0.7613 -0.53
MANB/NachJ m 10.756 6.1557   8 2.1764 0.5723 1.23, 20.5 -0.59
MANE/NachJ f 10.176 7.1505   5 3.1978 0.7027 3.04, 20.16 -0.67
MANE/NachJ m 5.8867 3.7017   6 1.5112 0.6288 0.36, 11.03 -0.9
MANF/NachJ f 11.086 7.5882   20 1.6968 0.6845 2.47, 38.35 -0.6
MANF/NachJ m 15.008 10.356   13 2.8723 0.69 3.87, 39.35 -0.32
SARA/NachJ f 44.857 8.8919   3 5.1337 0.1982 34.79, 51.64 1.83
SARA/NachJ m 30.51 13.523   8 4.7811 0.4432 11.67, 52.88 0.67
SARB/NachJ f 30.814 14.452   8 5.1094 0.469 17.04, 56.31 0.82
SARB/NachJ m 37.307 18.015   11 5.4316 0.4829 1.1
SARC/NachJ f 38.538 15.994   19 3.6692 0.415 22.2, 89.27 1.38
SARC/NachJ m 52.59 36.246   17 8.7909 0.6892 18.28, 170.3 2.07
TUCB/NachJ f 18.227 8.9188   7 3.371 0.4893 9.05, 31.71 -0.09
TUCB/NachJ m 6.2733 7.1888   3 4.1504 1.1459 1.09, 14.48 -0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 12.091 4.6412421612 21.2482260851 2.9337739149
129S1/SvImJ 2 10.75625 5.1890664862 20.9943400058 0.5181599942
A/J 1 10.176 6.5637076106 23.1262733232 -2.7742733232
A/J 2 5.8866666667 5.9918178653 17.7085947083 -5.935261375
BALB/cJ 1 11.086 3.2818538053 17.5611366616 4.6108633384
BALB/cJ 2 15.0084615385 4.070638657 23.039880111 6.9770429659
BTBR T+ Itpr3tf/J 1 13.221 4.6412421612 22.3782260851 4.0637739149
BTBR T+ Itpr3tf/J 2 18.7233333333 3.7895583559 26.2001771226 11.2464895441
C3H/HeJ 1 44.8566666667 8.4737100884 61.5753976365 28.1379356968
C3H/HeJ 2 30.51 5.1890664862 40.7480900058 20.2719099942
C57BL/6J 1 18.2271428571 5.5473454139 29.1721214562 7.2821642581
C57BL/6J 2 6.2733333333 8.4737100884 22.9920643032 -10.4453976365
CAST/EiJ 1 1.75 10.3781329725 22.2261800115 -18.7261800115
CAST/EiJ 2 4.165 10.3781329725 24.6411800115 -16.3111800115
DBA/2J 1 30.81375 5.1890664862 41.0518400058 20.5756599942
DBA/2J 2 37.3072727273 4.4252507683 46.0383452206 28.5762002339
FVB/NJ 1 38.5378947368 3.367110959 45.1812447784 31.8945446952
FVB/NJ 2 52.5876470588 3.5596702424 59.610918861 45.5643752566
LP/J 1 13.5726315789 3.367110959 20.2159816205 6.9292815373
LP/J 2 19.1311764706 3.5596702424 26.1544482728 12.1079046684


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 11.423625 3.4809316209 18.2915445638 4.5557054362
A/J both 8.0313333333 4.4436510588 16.798709819 -0.7360431524
BALB/cJ both 13.0472307692 2.6144150147 18.2055027443 7.8889587942
BTBR T+ Itpr3tf/J both 15.9721666667 2.9959089327 21.8831306875 10.0612026458
C3H/HeJ both 37.6833333333 4.9681529179 47.4855582365 27.8811084302
C57BL/6J both 12.2502380952 5.0640103624 22.2415908787 2.2588853118
CAST/EiJ both 2.9575 7.3384482009 17.436345739 -11.521345739
DBA/2J both 34.0605113636 3.4098847254 40.788254556 27.3327681713
FVB/NJ both 45.5627708978 2.449933083 50.3965180619 40.7290237338
LP/J both 16.3519040248 2.449933083 21.1856511888 11.5181568607




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA