Project measure / variable:   Project1194   OF_vertical_activity_time__30_35min__s

ID, description, units MPD:129366   OF_vertical_activity_time__30_35min__s   OF_vertical_activity_time__30_35min__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - OF_vertical_activity_time__30_35min__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means18.537   None 22.211   None
Median of the strain means14.845   None 20.645   None
SD of the strain means± 11.542 ± 13.528
Coefficient of variation (CV)0.6227 0.6091
Min–max range of strain means6.07   –   40.485   None 3.635   –   44.299   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2158.6696 2158.6696 11.1499 0.001
strain 9 27017.5596 3001.9511 15.5056 < 0.0001
sex:strain 9 617.6647 68.6294 0.3545 0.9548
Residuals 183 35429.4904 193.6038


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 14.403 3.4814   19 0.79868 0.2417 8.71, 22.87 -0.36
C57BL/6J m 23.891 7.3252   17 1.7766 0.3066 9.94, 37.14 0.12
GAIA/NachJ f 15.287 7.6827   10 2.4295 0.5026 5.24, 28.42 -0.28
GAIA/NachJ m 21.669 8.8961   15 2.297 0.4105 8.05, 37.63 -0.04
GAIC/NachJ f 6.585 3.9244   2   2.775 0.596 3.81, 9.36 -1.04
GAIC/NachJ m 3.635 1.987   2   1.405 0.5466 2.23, 5.04 -1.37
MANB/NachJ f 13.879 7.6623   10 2.423 0.5521 2.08, 24.07 -0.4
MANB/NachJ m 19.622 14.567   8 5.1502 0.7424 4.77, 51.64 -0.19
MANE/NachJ f 6.07 3.5079   5 1.5688 0.5779 2.57, 10.51 -1.08
MANE/NachJ m 7.25 5.431   6 2.2172 0.7491 1.62, 16.45 -1.11
MANF/NachJ f 10.61 5.4059   20 1.2088 0.5095 3.45, 21.04 -0.69
MANF/NachJ m 14.332 9.2577   13 2.5676 0.6459 1.95, 30.31 -0.58
SARA/NachJ f 32.723 10.392   3 6.0001 0.3176 24.12, 44.27 1.23
SARA/NachJ m 34.721 10.271   8 3.6314 0.2958 19.66, 51.59 0.92
SARB/NachJ f 28.644 11.956   8 4.2271 0.4174 12.34, 45.81 0.88
SARB/NachJ m 39.146 21.223   11 6.3989 0.5421 1.25
SARC/NachJ f 40.485 24.101   19 5.5291 0.5953 16.88, 104.1 1.9
SARC/NachJ m 44.299 26.774   17 6.4937 0.6044 11.76, 124.4 1.63
TUCB/NachJ f 16.68 8.8294   7 3.3372 0.5293 4.96, 28.82 -0.16
TUCB/NachJ m 13.543 4.9074   3 2.8333 0.3623 7.88, 16.54 -0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 13.879 4.4000428694 22.5603370084 5.1976629916
129S1/SvImJ 2 19.6225 4.9193974799 29.3285298432 9.9164701568
A/J 1 6.07 6.2226003009 18.3472645368 -6.2072645368
A/J 2 7.25 5.6804309186 18.4575578854 -3.9575578854
BALB/cJ 1 10.61 3.1113001504 16.7486322684 4.4713677316
BALB/cJ 2 14.3323076923 3.8590928839 21.9463439338 6.7182714508
BTBR T+ Itpr3tf/J 1 15.287 4.4000428694 23.9683370084 6.6056629916
BTBR T+ Itpr3tf/J 2 21.6686666667 3.5926199588 28.7569486519 14.5803846814
C3H/HeJ 1 32.7233333333 8.0333424452 48.573213696 16.8734529707
C3H/HeJ 2 34.72125 4.9193974799 44.4272798432 25.0152201568
C57BL/6J 1 16.68 5.2590571198 27.0561823597 6.3038176403
C57BL/6J 2 13.5433333333 8.0333424452 29.393213696 -2.3065470293
CAST/EiJ 1 6.585 9.8387949598 25.9970596863 -12.8270596863
CAST/EiJ 2 3.635 9.8387949598 23.0470596863 -15.7770596863
DBA/2J 1 28.64375 4.9193974799 38.3497798432 18.9377201568
DBA/2J 2 39.1463636364 4.195276267 47.4236936985 30.8690335742
FVB/NJ 1 40.4852631579 3.1921266012 46.7833669767 34.1871593391
FVB/NJ 2 44.2994117647 3.3746788302 50.9576933065 37.6411302229
LP/J 1 14.4031578947 3.1921266012 20.7012617135 8.105054076
LP/J 2 23.8911764706 3.3746788302 30.5494580124 17.2328949288


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 16.75075 3.300032152 23.2617527563 10.2397472437
A/J both 6.66 4.2127203184 14.9717473834 -1.6517473834
BALB/cJ both 12.4711538462 2.4785472818 17.3613571654 7.5809505269
BTBR T+ Itpr3tf/J both 18.4778333333 2.8402154593 24.081612276 12.8740543906
C3H/HeJ both 33.7222916667 4.7099645011 43.0151077472 24.4294755861
C57BL/6J both 15.1116666667 4.8008403595 24.5837818987 5.6395514347
CAST/EiJ both 5.11 6.9570786348 18.836399041 -8.616399041
DBA/2J both 33.8950568182 3.2326774708 40.273167986 27.5169456504
FVB/NJ both 42.3923374613 2.3226132612 46.9748811 37.8097938226
LP/J both 19.1471671827 2.3226132612 23.7297108214 14.564623544




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA