Project measure / variable:   Project1194   OF_stereotypic_activity_count__30_35min_

ID, description, units MPD:129362   OF_stereotypic_activity_count__30_35min_   OF_stereotypic_activity_count__30_35min_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - OF_stereotypic_activity_count__30_35min_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means91.82   None 98.11   None
Median of the strain means87.15   None 87.94   None
SD of the strain means± 21.328 ± 37.2
Coefficient of variation (CV)0.2323 0.3792
Min–max range of strain means62.5   –   131.4   None 70.33   –   193.0   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 351.9673 351.9673 0.2702 0.6038
strain 9 75849.4153 8427.7128 6.4708 < 0.0001
sex:strain 9 21367.981 2374.2201 1.8229 0.0667
Residuals 183 238344.2029 1302.4273


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 124.5 36.058   19 8.2722 0.2897 77.0, 215.0 1.53
C57BL/6J m 113.9 34.965   17 8.4803 0.3069 43.0, 169.0 0.42
GAIA/NachJ f 131.4 63.8   10 20.176 0.4856 77.0, 286.0 1.86
GAIA/NachJ m 99.2 42.596   15 10.998 0.4294 55.0, 193.0 0.03
GAIC/NachJ f 83.5 14.849   2   10.5 0.1778 73.0, 94.0 -0.39
GAIC/NachJ m 193.0 94.75   2   67.0 0.4909 126.0, 260.0 2.55
MANB/NachJ f 62.5 26.726   10 8.4515 0.4276 -1.37
MANB/NachJ m 73.62 21.62   8 7.6437 0.2936 48.0, 113.0 -0.66
MANE/NachJ f 87.6 35.767   5 15.996 0.4083 58.0, 146.0 -0.2
MANE/NachJ m 76.67 35.2   6 14.37 0.4591 28.0, 110.0 -0.58
MANF/NachJ f 86.7 31.873   20 7.1271 0.3676 25.0, 161.0 -0.24
MANF/NachJ m 74.0 28.607   13 7.934 0.3866 44.0, 119.0 -0.65
SARA/NachJ f 91.0 54.53   3 31.48 0.5992 47.0, 152.0 -0.04
SARA/NachJ m 108.4 43.375   8 15.335 0.4002 55.0, 169.0 0.28
SARB/NachJ f 95.62 34.255   8 12.111 0.3582 38.0, 143.0 0.18
SARB/NachJ m 99.91 43.147   11 13.009 0.4319 0.05
SARC/NachJ f 83.63 26.889   19 6.1688 0.3215 42.0, 137.0 -0.38
SARC/NachJ m 72.06 24.358   17 5.9077 0.338 31.0, 129.0 -0.7
TUCB/NachJ f 71.71 15.228   7 5.7558 0.2123 47.0, 91.0 -0.94
TUCB/NachJ m 70.33 45.622   3 26.34 0.6486 43.0, 123.0 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 62.5 11.4123938694 85.0167890846 39.9832109154
129S1/SvImJ 2 73.625 12.759444239 98.7995355141 48.4504644859
A/J 1 87.6 16.1395621893 119.4435485045 55.7564514955
A/J 2 76.6666666667 14.7333371322 105.7357163782 47.5976169551
BALB/cJ 1 86.7 8.0697810946 102.6217742523 70.7782257477
BALB/cJ 2 74.0 10.0093315627 93.7485304357 54.2514695643
BTBR T+ Itpr3tf/J 1 131.4 11.4123938694 153.9167890846 108.8832109154
BTBR T+ Itpr3tf/J 2 99.2 9.3181805746 117.584881301 80.815118699
C3H/HeJ 1 91.0 20.8360851914 132.1098443474 49.8901556526
C3H/HeJ 2 108.375 12.759444239 133.5495355141 83.2004644859
C57BL/6J 1 71.7142857143 13.6404196537 98.6269962185 44.80157521
C57BL/6J 2 70.3333333333 20.8360851914 111.4431776807 29.223488986
CAST/EiJ 1 83.5 25.518888478 133.8490710281 33.1509289719
CAST/EiJ 2 193.0 25.518888478 243.3490710281 142.6509289719
DBA/2J 1 95.625 12.759444239 120.7995355141 70.4504644859
DBA/2J 2 99.9090909091 10.8812906082 121.3780069312 78.440174887
FVB/NJ 1 83.6315789474 8.2794207092 99.966974657 67.2961832378
FVB/NJ 2 72.0588235294 8.7529065368 89.3284124185 54.7892346403
LP/J 1 124.4736842105 8.2794207092 140.8090799201 108.1382885009
LP/J 2 113.9411764706 8.7529065368 131.2107653597 96.6715875815


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 68.0625 8.5592954021 84.9500918134 51.1749081866
A/J both 82.1333333333 10.926535255 103.6915175825 60.5751490841
BALB/cJ both 80.35 6.428609594 93.0337233267 67.6662766733
BTBR T+ Itpr3tf/J both 115.3 7.3666685661 129.8345248558 100.7654751442
C3H/HeJ both 99.6875 12.2162377943 123.7902827263 75.5847172737
C57BL/6J both 71.0238095238 12.4519425636 95.5916405684 46.4559784792
CAST/EiJ both 138.25 18.0445790911 173.8521695504 102.6478304496
DBA/2J both 97.7670454545 8.3845975245 114.3099562739 81.2241346352
FVB/NJ both 77.8452012384 6.0241634299 89.7309474643 65.9594550125
LP/J both 119.2074303406 6.0241634299 131.0931765665 107.3216841146




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA